RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 HTR1DP28221 377 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 SUPT4H1P63272 117 aaKnown RBP5.06□□□□□ -1.6
CBWD3-210ENST00000614398 EBI3Q14213 229 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 ABCA11PQ4W5N1 156 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 UTF1Q5T230 341 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 THNSL2Q86YJ6 484 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 SGPP2Q8IWX5 399 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 OR5AN1Q8NGI8 311 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 OR10X1Q8NGY0 326 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 UBALD1Q8TB05 177 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 SECTM1Q8WVN6 248 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 RTN4IP1Q8WWV3 396 aaPredicted RBP5.06□□□□□ -1.6
CBWD3-210ENST00000614398 C18orf12Q96KH6 178 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 TMEM56Q96MV1 263 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 NABP2Q9BQ15 211 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 SNHG12Q9BXW3 62 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 CHIAQ9BZP6 476 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 MEGF9Q9H1U4 602 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 KCNS2Q9ULS6 477 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 TMEM56-RWDD3S4R434 201 aa5.06□□□□□ -1.6
CBWD3-210ENST00000614398 ARID1AO14497 2285 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 CENPEQ02224 2701 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 CRYBG3Q68DQ2 2970 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 A0A1W2PPI3 338 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 KANTRA0A1W2PQU2 76 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 FAM90A9PA6NNJ1 464 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 SLC25A4P12235 298 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 CD1BP29016 333 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 MC5RP33032 325 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 PIGPP57054 158 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 FXYD4P59646 89 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 SRSF4Q08170 494 aaKnown RBP5.05□□□□□ -1.6
CBWD3-210ENST00000614398 JOSD1Q15040 202 aaPredicted RBP5.05□□□□□ -1.6
CBWD3-210ENST00000614398 FAM53AQ6NSI3 398 aaPredicted RBP5.05□□□□□ -1.6
CBWD3-210ENST00000614398 CDPF1Q6NVV7 123 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 PDPNQ86YL7 162 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 OR10D4PQ8NGN7 298 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 MITD1Q8WV92 249 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 TOMM40LQ969M1 308 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 ABHD14BQ96IU4 210 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 TMEM222Q9H0R3 208 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 C7orf69Q9H7B7 122 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 TREM1Q9NP99 234 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 PUS1Q9Y606 427 aaKnown RBP eCLIP5.05□□□□□ -1.6
CBWD3-210ENST00000614398 TEX13DA0A0J9YY54 714 aaPredicted RBP5.05□□□□□ -1.6
CBWD3-210ENST00000614398 TMEM238C9JI98 176 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 HSD17B6O14756 317 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 TGFAP01135 160 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 ARG1P05089 322 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 CT45A6P0DMU7 189 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 CT45A5P0DMU8 189 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 CT45A7P0DMV0 189 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 F2RL1P55085 397 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 KIAA0141Q14154 515 aaPredicted RBP5.05□□□□□ -1.6
CBWD3-210ENST00000614398 TMEM187Q14656 261 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 TMEM177Q53S58 311 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 KLF17Q5JT82 389 aaPredicted RBP5.05□□□□□ -1.6
CBWD3-210ENST00000614398 TBC1D26Q86UD7 250 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 LYG1Q8N1E2 194 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 HIST3H2BBQ8N257 126 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 CIARTQ8N365 385 aaPredicted RBP5.05□□□□□ -1.6
CBWD3-210ENST00000614398 ADAD2Q8NCV1 583 aaKnown RBP5.05□□□□□ -1.6
CBWD3-210ENST00000614398 OR2D3Q8NGH3 330 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 CFHR4Q92496 578 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 SAT2Q96F10 170 aaPredicted RBP5.05□□□□□ -1.6
CBWD3-210ENST00000614398 PLEKHA2Q9HB19 425 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 FLVCR2Q9UPI3 526 aa5.05□□□□□ -1.6
CBWD3-210ENST00000614398 ASH1LQ9NR48 2969 aaKnown RBP5.04□□□□□ -1.6
CBWD3-210ENST00000614398 AKAP6Q13023 2319 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.04□□□□□ -1.6
CBWD3-210ENST00000614398 FXYD6-FXYD2A0A087WZ82 144 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 C3orf85A0A1B0GTC6 90 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 TGOLN2O43493 480 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 CDS2O95674 445 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 RLN1P04808 185 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 P0C879 139 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 SLC25A6P12236 298 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 COX7A1P24310 79 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 DHRS2Q13268 280 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 PPP1R1AQ13522 171 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 RHEBQ15382 184 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 LTC4SQ16873 150 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 GPR157Q5UAW9 335 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 DMRTA1Q5VZB9 504 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 LIAT1Q6ZQX7 453 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 C1orf229Q6ZS94 237 aaPredicted RBP5.04□□□□□ -1.6
CBWD3-210ENST00000614398 OR4S2Q8NH73 311 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 LEAP2Q969E1 77 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 LHX4Q969G2 390 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 PRO1933Q9H354 126 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 FAM96BQ9Y3D0 163 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 RBM7Q9Y580 266 aaKnown RBP5.04□□□□□ -1.6
CBWD3-210ENST00000614398 ABCA12Q86UK0 2595 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 IGHV1-3A0A0C4DH29 117 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 H0YJW9 148 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 M0R1X1 148 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 PPP1R2P9O14990 202 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 YIF1AO95070 293 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 APOA2P02652 100 aa5.04□□□□□ -1.6
CBWD3-210ENST00000614398 CD5P06127 495 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms