RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	HLA-G	P17693	338 aa		12.85	□□□□□ -0.35
CCND3-222	ENST00000612455	LPAR6	P43657	344 aa		12.85	□□□□□ -0.35
CCND3-222	ENST00000612455	RNASE12	Q5GAN4	147 aa	Known RBP	12.85	□□□□□ -0.35
CCND3-222	ENST00000612455	RNASE10	Q5GAN6	216 aa	Known RBP	12.85	□□□□□ -0.35
CCND3-222	ENST00000612455	SLC38A6	Q8IZM9	456 aa		12.85	□□□□□ -0.35
CCND3-222	ENST00000612455	MRAP	Q8TCY5	172 aa		12.85	□□□□□ -0.35
CCND3-222	ENST00000612455	DIRAS2	Q96HU8	199 aa		12.85	□□□□□ -0.35
CCND3-222	ENST00000612455	SORL1	Q92673	2214 aa		12.85	□□□□□ -0.35
CCND3-222	ENST00000612455	FAM223B	A6NKX1	122 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	IFNA6	P05013	189 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	MYOD1	P15172	320 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	PTBP1	P26599	531 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	TAS2R19	P59542	299 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	OR2B8P	P59922	312 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	RND3	P61587	244 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	ACSM6	Q6P461	480 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	FAM223A	Q8IWN6	122 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	SMIM4	Q8WVI0	70 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	RBM38	Q9H0Z9	239 aa	Known RBP	12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	HRASLS	Q9HDD0	168 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	AKIP1	Q9NQ31	210 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	TMEM140	Q9NV12	185 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	ZNF257	Q9Y2Q1	563 aa		12.84	□□□□□ -0.35
CCND3-222	ENST00000612455	MARCH11	A6NNE9	402 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	PRH1	P02810	166 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	CTRB1	P17538	263 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	TNFSF8	P32971	234 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	RHOG	P84095	191 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	KLF5	Q13887	457 aa	Predicted RBP	12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	PHLDA2	Q53GA4	152 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	CTRB2	Q6GPI1	263 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	TBC1D26	Q86UD7	250 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	ZNF429	Q86V71	674 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	NECAP1	Q8NC96	275 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	DMBX1	Q8NFW5	382 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	OR4D10	Q8NGI6	311 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	TERB2	Q8NHR7	220 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	ZNF486	Q96H40	463 aa	Predicted RBP	12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	FANCD2OS	Q96PS1	177 aa		12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	FYTTD1	Q96QD9	318 aa	Known RBP	12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	SRSF8	Q9BRL6	282 aa	Known RBP	12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	PEF1	Q9UBV8	284 aa	Known RBP	12.83	□□□□□ -0.36
CCND3-222	ENST00000612455	ANKRD34B	A5PLL1	514 aa		12.82	□□□□□ -0.36
CCND3-222	ENST00000612455	GSTZ1	O43708	216 aa	Predicted RBP	12.82	□□□□□ -0.36
CCND3-222	ENST00000612455	RAB3D	O95716	219 aa		12.82	□□□□□ -0.36
CCND3-222	ENST00000612455	AREG	P15514	252 aa		12.82	□□□□□ -0.36
CCND3-222	ENST00000612455	ZP3	P21754	424 aa		12.82	□□□□□ -0.36
CCND3-222	ENST00000612455	PSMB6	P28072	239 aa		12.82	□□□□□ -0.36
CCND3-222	ENST00000612455	S100G	P29377	79 aa		12.82	□□□□□ -0.36
CCND3-222	ENST00000612455	DEFA5	Q01523	94 aa		12.82	□□□□□ -0.36
CCND3-222	ENST00000612455	IL18	Q14116	193 aa		12.82	□□□□□ -0.36
CCND3-222	ENST00000612455	STEAP1B	Q6NZ63	245 aa		12.82	□□□□□ -0.36
CCND3-222	ENST00000612455	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.82	□□□□□ -0.36
CCND3-222	ENST00000612455	TEX50	A0A1B0GTY4	177 aa		12.81	□□□□□ -0.36
CCND3-222	ENST00000612455	KRAS	P01116	189 aa		12.81	□□□□□ -0.36
CCND3-222	ENST00000612455	IGKV1-39	P01597	117 aa		12.81	□□□□□ -0.36
CCND3-222	ENST00000612455	IGKV1D-39	P04432	117 aa		12.81	□□□□□ -0.36
CCND3-222	ENST00000612455	ERVK-16	P61578	105 aa		12.81	□□□□□ -0.36
CCND3-222	ENST00000612455	ATP5G2	Q06055	141 aa		12.81	□□□□□ -0.36
CCND3-222	ENST00000612455	MCFD2	Q8NI22	146 aa		12.81	□□□□□ -0.36
CCND3-222	ENST00000612455	SEC22A	Q96IW7	307 aa		12.81	□□□□□ -0.36
CCND3-222	ENST00000612455	COMMD5	Q9GZQ3	224 aa		12.81	□□□□□ -0.36
CCND3-222	ENST00000612455	RSL24D1	Q9UHA3	163 aa	Known RBP	12.81	□□□□□ -0.36
CCND3-222	ENST00000612455	DMRT1	Q9Y5R6	373 aa		12.81	□□□□□ -0.36
CCND3-222	ENST00000612455	IGLC7	A0M8Q6	106 aa		12.8	□□□□□ -0.36
CCND3-222	ENST00000612455	ZNF701	M0R085	212 aa	Predicted RBP	12.8	□□□□□ -0.36
CCND3-222	ENST00000612455	TRBV12-3	P01733	135 aa		12.8	□□□□□ -0.36
CCND3-222	ENST00000612455	RPA2	P15927	270 aa		12.8	□□□□□ -0.36
CCND3-222	ENST00000612455	G6PC	P35575	357 aa		12.8	□□□□□ -0.36
CCND3-222	ENST00000612455	MEF2D	Q14814	521 aa		12.8	□□□□□ -0.36
CCND3-222	ENST00000612455	C19orf35	Q6ZS72	473 aa		12.8	□□□□□ -0.36
CCND3-222	ENST00000612455	MRGPRF	Q96AM1	343 aa		12.8	□□□□□ -0.36
CCND3-222	ENST00000612455	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	DPPA5	A6NC42	116 aa		12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	OR2J3	O76001	311 aa		12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	NDUFB8	O95169	186 aa		12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	HIST1H1B	P16401	226 aa	Known RBP	12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	FAM209B	Q5JX69	171 aa		12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	THOC7	Q6I9Y2	204 aa	Known RBP	12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	OR1L8	Q8NGR8	309 aa		12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	ZFAND1	Q8TCF1	268 aa		12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	QTRT1	Q9BXR0	403 aa	Known RBP	12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	NDUFA4L2	Q9NRX3	87 aa		12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	FBXL7	Q9UJT9	491 aa		12.79	□□□□□ -0.36
CCND3-222	ENST00000612455	IGLV11-55	A0A075B6I3	123 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	ANKRD20A5P	A0PJZ0	165 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	FABP12	A6NFH5	140 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	SAP30	O75446	220 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	DHFR	P00374	187 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	TRAPPC2	P0DI81	140 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	TRAPPC2B	P0DI82	140 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	PGAM2	P15259	253 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	PI3	P19957	117 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	ECI1	P42126	302 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	PIGP	P57054	158 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	EXOSC2	Q13868	293 aa	Known RBP	12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	C15orf32	Q32M92	178 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	IL34	Q6ZMJ4	242 aa		12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	12.78	□□□□□ -0.36
CCND3-222	ENST00000612455	TSC22D3	Q99576	134 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms