RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 SEC22CQ9BRL7 303 aa12.23□□□□□ -0.45
GRIA3-205ENST00000611689 FAM103A1Q9BTL3 118 aaKnown RBP12.23□□□□□ -0.45
GRIA3-205ENST00000611689 SHPKQ9UHJ6 478 aa12.23□□□□□ -0.45
GRIA3-205ENST00000611689 A0A0B4J293 547 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 PIGBOS1A0A0B4J2F0 54 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 VDAC1P21796 283 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 CRIP2P52943 208 aaPredicted RBP12.22□□□□□ -0.45
GRIA3-205ENST00000611689 RGS21Q2M5E4 152 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 KRTAP21-3Q3LHN1 58 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 Q6ZRM9 215 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 OR4A16Q8NH70 328 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 SGMS2Q8NHU3 365 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 COQ8AQ8NI60 647 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 GRPEL2Q8TAA5 225 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 ZNF431Q8TF32 576 aaPredicted RBP12.22□□□□□ -0.45
GRIA3-205ENST00000611689 ABHD5Q8WTS1 349 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 MITD1Q8WV92 249 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 SRSF12Q8WXF0 261 aaKnown RBP12.22□□□□□ -0.45
GRIA3-205ENST00000611689 GPR146Q96CH1 333 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 PRNDQ9UKY0 176 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 WSB1Q9Y6I7 421 aa12.22□□□□□ -0.45
GRIA3-205ENST00000611689 TEX50A0A1B0GTY4 177 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 DUXBA0A1W2PPF3 345 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 MSGN1A6NI15 193 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 DBX1A6NMT0 343 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 C15orf61A6NNL5 157 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 E7EUB6 86 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 G3V318 75 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 HAX1O00165 279 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 RPL27AP46776 148 aaKnown RBP12.21□□□□□ -0.45
GRIA3-205ENST00000611689 OR2B8PP59922 312 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 C19orf54Q5BKX5 351 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 NMSQ5H8A3 153 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 CENPVQ7Z7K6 275 aaPredicted RBP12.21□□□□□ -0.45
GRIA3-205ENST00000611689 KLHDC1Q8N7A1 406 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 WIPF2Q8TF74 440 aaPredicted RBP12.21□□□□□ -0.45
GRIA3-205ENST00000611689 CHPT1Q8WUD6 406 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 COMMD5Q9GZQ3 224 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 TMEM14BQ9NUH8 114 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 FKBP11Q9NYL4 201 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 OR51B2Q9Y5P1 312 aa12.21□□□□□ -0.45
GRIA3-205ENST00000611689 TRAV41A0A0B4J266 112 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 A0A1B0GW64 132 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 CGB1A6NKQ9 187 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 PRAF2O60831 178 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 DHFRP00374 187 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 OPN1MWP04001 364 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 OPN1MW2P0DN77 364 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 OPN1MW3P0DN78 364 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 CFHR3Q02985 330 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 TMEM267Q0VDI3 215 aaPredicted RBP12.2□□□□□ -0.46
GRIA3-205ENST00000611689 ECSCRQ19T08 205 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 AKIRIN2Q53H80 203 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 LFNGQ8NES3 379 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 PHB2Q99623 299 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 SPIN2AQ99865 258 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 SPIN2BQ9BPZ2 258 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 QTRT1Q9BXR0 403 aaKnown RBP12.2□□□□□ -0.46
GRIA3-205ENST00000611689 GON7Q9BXV9 100 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 FOXA2Q9Y261 457 aaPredicted RBP12.2□□□□□ -0.46
GRIA3-205ENST00000611689 TMED3Q9Y3Q3 217 aa12.2□□□□□ -0.46
GRIA3-205ENST00000611689 PSMB11A5LHX3 300 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 TEX22C9J3V5 150 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 RBMXL2O75526 392 aaKnown RBP12.19□□□□□ -0.46
GRIA3-205ENST00000611689 HOXB5P09067 269 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 PPIFP30405 207 aaKnown RBP12.19□□□□□ -0.46
GRIA3-205ENST00000611689 KRTAP10-3P60369 221 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 HSPE1P61604 102 aaKnown RBP12.19□□□□□ -0.46
GRIA3-205ENST00000611689 ASPHD1Q5U4P2 390 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 GGNBP1Q5YKI7 109 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 UNQ5815/PRO19632Q6UWF5 114 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 C10orf99Q6UWK7 81 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 ZNF329Q86UD4 541 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 ZNF429Q86V71 674 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 C12orf45Q8N5I9 185 aaPredicted RBP12.19□□□□□ -0.46
GRIA3-205ENST00000611689 MINDY2Q8NBR6 621 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 OR1L8Q8NGR8 309 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 FYTTD1Q96QD9 318 aaKnown RBP12.19□□□□□ -0.46
GRIA3-205ENST00000611689 GPN1Q9HCN4 374 aaPredicted RBP12.19□□□□□ -0.46
GRIA3-205ENST00000611689 NDUFA4L2Q9NRX3 87 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.19□□□□□ -0.46
GRIA3-205ENST00000611689 CACNG5Q9UF02 275 aa12.19□□□□□ -0.46
GRIA3-205ENST00000611689 HMX3A6NHT5 357 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 SNRPGP15A8MWD9 76 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 PLXNB1O43157 2135 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 ST8SIA3O43173 380 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 ADAP1O75689 374 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 TRAPPC2P0DI81 140 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 TRAPPC2BP0DI82 140 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 APELAP0DMC3 54 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 SULT1A3P0DMM9 295 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 SULT1A4P0DMN0 295 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 SLC35B1P78383 322 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 OXA1LQ15070 435 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 AARDQ4LEZ3 155 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 OR5AU1Q8NGC0 362 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 OR5B3Q8NH48 314 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 WFDC12Q8WWY7 111 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 TMEM68Q96MH6 324 aa12.18□□□□□ -0.46
GRIA3-205ENST00000611689 COA4Q9NYJ1 87 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms