RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 CENPWQ5EE01 88 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 COL5A1-AS1Q5SY13 56 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 C5orf17Q8NAS9 161 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 C1orf147Q96MC9 270 aaPredicted RBP10.46□□□□□ -0.73
CDH1-212ENST00000611625 PGPA6NDG6 321 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 SLC25A17O43808 307 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 CD55P08174 381 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 MST1LQ2TV78 715 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 WDR31Q8NA23 367 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 MBD3L1Q8WWY6 194 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 WDYHV1Q96HA8 205 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 C19orf24Q9BVV8 132 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 TNFRSF19Q9NS68 423 aa10.46□□□□□ -0.73
CDH1-212ENST00000611625 SRIP30626 198 aa10.46□□□□□ -0.74
CDH1-212ENST00000611625 A0A1B0GW64 132 aa10.46□□□□□ -0.74
CDH1-212ENST00000611625 E9PLN8 166 aa10.46□□□□□ -0.74
CDH1-212ENST00000611625 TMEM30BQ3MIR4 351 aa10.46□□□□□ -0.74
CDH1-212ENST00000611625 FOXL2NBQ6ZUU3 175 aa10.46□□□□□ -0.74
CDH1-212ENST00000611625 GATAD1Q8WUU5 269 aa10.46□□□□□ -0.74
CDH1-212ENST00000611625 RFNGQ9Y644 331 aa10.46□□□□□ -0.74
CDH1-212ENST00000611625 A0A1B0GV90 55 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 GLRXP35754 106 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 GBGT1Q8N5D6 347 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 ELOVL1Q9BW60 279 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 VSIRQ9H7M9 311 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 RAMP3O60896 148 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 AMY1AP04745 511 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 OR4A8P0C604 315 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 C1orf162Q8NEQ5 155 aaPredicted RBP10.45□□□□□ -0.74
CDH1-212ENST00000611625 TRBV9A0A0B4J1U6 114 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 SCO2A0A1W2PP80 73 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 C9orf172C9J069 976 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 BMPR1BO00238 502 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 ATP5IP56385 69 aaPredicted RBP10.45□□□□□ -0.74
CDH1-212ENST00000611625 CSRP2Q16527 193 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 PRNTQ86SH4 94 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 DOLPP1Q86YN1 238 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 RIF1Q5UIP0 2472 aaKnown RBP10.45□□□□□ -0.74
CDH1-212ENST00000611625 DOCK7Q96N67 2140 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 ETV2O00321 342 aaPredicted RBP10.45□□□□□ -0.74
CDH1-212ENST00000611625 C5orf24Q7Z6I8 188 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 TMEM171Q8WVE6 324 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 COA4Q9NYJ1 87 aa10.45□□□□□ -0.74
CDH1-212ENST00000611625 CORTO00230 105 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 TNFSF10P50591 281 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 SPATA45Q537H7 98 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 HSPB8Q9UJY1 196 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 IGHV2OR16-5A0A0B4J2B6 119 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 CXCL1P09341 107 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 KRTCAP3Q53RY4 240 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 SSX8Q7RTT4 187 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 DMRTA2Q96SC8 542 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 ANAPC10Q9UM13 185 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 TRAV1-1A0A0B4J248 108 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 SLC17A3O00476 420 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 OR2J3O76001 311 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 CGAP01215 116 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 CEACAM1P13688 526 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 IGFBP2P18065 325 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 HGFACQ04756 655 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 OR4A47Q6IF82 309 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 OR4C13Q8NGP0 309 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 NPIPB3Q92617 1050 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 MRPL32Q9BYC8 188 aaKnown RBP10.44□□□□□ -0.74
CDH1-212ENST00000611625 CACNA1GO43497 2377 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 SCNM1Q9BWG6 230 aa10.44□□□□□ -0.74
CDH1-212ENST00000611625 TMSB15BA0A087X1C1 80 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 C1QTNF9BB2RNN3 333 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 FAM201AQ5SY85 155 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 OR51G1Q8NGK1 321 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 IL36BQ9NZH7 164 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 IGHV3-48P01763 117 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 GFRA1P56159 465 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 TIMM23BQ5SRD1 257 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 HSPB7Q9UBY9 170 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 C9JQL5 133 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 C1QL4Q86Z23 238 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 UQCR10Q9UDW1 63 aa10.43□□□□□ -0.74
CDH1-212ENST00000611625 PMCHL1Q16048 86 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.42□□□□□ -0.74
CDH1-212ENST00000611625 IMMP2LQ96T52 175 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 SSBP3Q9BWW4 388 aaPredicted RBP10.42□□□□□ -0.74
CDH1-212ENST00000611625 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.42□□□□□ -0.74
CDH1-212ENST00000611625 ASCL4Q6XD76 172 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 TMEM170AQ8WVE7 144 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 RBM14Q96PK6 669 aaKnown RBP10.42□□□□□ -0.74
CDH1-212ENST00000611625 TRBV24-1A0A075B6N3 115 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 ORM1P02763 201 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 WDR82Q6UXN9 313 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 C1RLQ9NZP8 487 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 J3QR89 54 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 ATXN7O15265 892 aaPredicted RBP10.42□□□□□ -0.74
CDH1-212ENST00000611625 TFF1P04155 84 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 B3GALT5-AS1P59052 145 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 TMEM177Q53S58 311 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 OR9G1Q8NH87 305 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 TMEM186Q96B77 213 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 SNRNP40Q96DI7 357 aaKnown RBP10.42□□□□□ -0.74
CDH1-212ENST00000611625 SGK494Q96LW2 274 aa10.42□□□□□ -0.74
CDH1-212ENST00000611625 GOLT1BQ9Y3E0 138 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms