RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 FXYD3Q14802 87 aa6.73□□□□□ -1.33
SNCA-212ENST00000611107 RBMS2Q15434 407 aaKnown RBP6.73□□□□□ -1.33
SNCA-212ENST00000611107 TNXAQ16473 311 aa6.73□□□□□ -1.33
SNCA-212ENST00000611107 ZNF562Q6V9R5 426 aa6.73□□□□□ -1.33
SNCA-212ENST00000611107 RNF152Q8N8N0 203 aa6.73□□□□□ -1.33
SNCA-212ENST00000611107 VSTM2AQ8TAG5 236 aa6.73□□□□□ -1.33
SNCA-212ENST00000611107 MYOZ3Q8TDC0 251 aa6.73□□□□□ -1.33
SNCA-212ENST00000611107 ABHD5Q8WTS1 349 aa6.73□□□□□ -1.33
SNCA-212ENST00000611107 SRSF12Q8WXF0 261 aaKnown RBP6.73□□□□□ -1.33
SNCA-212ENST00000611107 SEC22AQ96IW7 307 aa6.73□□□□□ -1.33
SNCA-212ENST00000611107 OR2A7Q96R45 310 aa6.73□□□□□ -1.33
SNCA-212ENST00000611107 C7orf50Q9BRJ6 194 aaKnown RBP6.73□□□□□ -1.33
SNCA-212ENST00000611107 ALX4Q9H161 411 aaPredicted RBP6.73□□□□□ -1.33
SNCA-212ENST00000611107 PRR13Q9NZ81 148 aa6.73□□□□□ -1.33
SNCA-212ENST00000611107 SORL1Q92673 2214 aa6.73□□□□□ -1.33
SNCA-212ENST00000611107 TRAV41A0A0B4J266 112 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 CREBL2O60519 120 aaPredicted RBP6.72□□□□□ -1.33
SNCA-212ENST00000611107 RBMXL2O75526 392 aaKnown RBP6.72□□□□□ -1.33
SNCA-212ENST00000611107 UPK1BO75841 260 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 NDUFB6O95139 128 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 KRASP01116 189 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 IGKV1-5P01602 117 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 PF4P02776 101 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 IL6RP08887 468 aaPredicted RBP6.72□□□□□ -1.33
SNCA-212ENST00000611107 OR9G9P0C7N8 305 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 PF4V1P10720 104 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 CD33P20138 364 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 VDAC1P21796 283 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 SP6Q3SY56 376 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 TMED4Q7Z7H5 227 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 MMD2Q8IY49 270 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 MINDY2Q8NBR6 621 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 LFNGQ8NES3 379 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 DMBX1Q8NFW5 382 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 GALNT14Q96FL9 552 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 OR5B12Q96R08 314 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 SLC25A21Q9BQT8 299 aaPredicted RBP6.72□□□□□ -1.33
SNCA-212ENST00000611107 TMEM222Q9H0R3 208 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 NUBP2Q9Y5Y2 271 aa6.72□□□□□ -1.33
SNCA-212ENST00000611107 HUWE1Q7Z6Z7 4374 aaKnown RBP6.71□□□□□ -1.33
SNCA-212ENST00000611107 A0A0G2JRQ6 117 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 TEX13DA0A0J9YY54 714 aaPredicted RBP6.71□□□□□ -1.34
SNCA-212ENST00000611107 CGB1A6NKQ9 187 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 DBX1A6NMT0 343 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 NUDT19A8MXV4 375 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 TEX22C9J3V5 150 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 E7EUB6 86 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 I3L521 148 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 CCL24O00175 119 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 UPK2O00526 184 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 IGLV1-40P01703 118 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 SERPINE2P07093 398 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 FGF2P09038 288 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 APELAP0DMC3 54 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 OR2B8PP59922 312 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 ERVK-16P61578 105 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 RPL8P62917 257 aaKnown RBP6.71□□□□□ -1.34
SNCA-212ENST00000611107 FOXE3Q13461 319 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 ASAH1Q13510 395 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 TMEM187Q14656 261 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 IZUMO4Q1ZYL8 232 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 TEX38Q6PEX7 206 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 ZNF695Q8IW36 515 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 ZNF491Q8N8L2 437 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 OR4A5Q8NH83 315 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 GLYATL2Q8WU03 294 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 FLVCR2Q9UPI3 526 aa6.71□□□□□ -1.34
SNCA-212ENST00000611107 A0A1W2PN81 502 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 C15orf61A6NNL5 157 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 CENPXA8MT69 81 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 B3GALNT1O75752 331 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 CNIH1O95406 144 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 CDS2O95674 445 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 AKR1C4P17516 323 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 HLA-GP17693 338 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 SLC6A1P30531 599 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 MAS1LP35410 378 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 CHRNA7P36544 502 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 RPL27AP46776 148 aaKnown RBP6.7□□□□□ -1.34
SNCA-212ENST00000611107 AKR1C2P52895 323 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 SLC35B1P78383 322 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 DHODHQ02127 395 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 PPP1R1AQ13522 171 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 TRIM16LQ309B1 348 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 AKIRIN2Q53H80 203 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 UNQ5815/PRO19632Q6UWF5 114 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 C19orf35Q6ZS72 473 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 SGPP2Q8IWX5 399 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 CADM3Q8N126 398 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 CENPSQ8N2Z9 138 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 RBPMSQ93062 196 aaKnown RBP6.7□□□□□ -1.34
SNCA-212ENST00000611107 SCGB3A2Q96PL1 93 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 AIFM2Q9BRQ8 373 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 GON7Q9BXV9 100 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 C20orf85Q9H1P6 137 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 ZFP57Q9NU63 452 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 TMEM14BQ9NUH8 114 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 FOXA2Q9Y261 457 aaPredicted RBP6.7□□□□□ -1.34
SNCA-212ENST00000611107 NSG2Q9Y328 171 aa6.7□□□□□ -1.34
SNCA-212ENST00000611107 IGLC7A0M8Q6 106 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms