RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CT45A7P0DMV0 189 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 NDUFB7P17568 137 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 S100PP25815 95 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 RPL29P47914 159 aaKnown RBP8.56□□□□□ -1.04
PABPC1-224ENST00000610907 RPL23P62829 140 aaKnown RBP8.56□□□□□ -1.04
PABPC1-224ENST00000610907 RPL31P62899 125 aaKnown RBP8.56□□□□□ -1.04
PABPC1-224ENST00000610907 CCL8P80075 99 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 PRCDQ00LT1 54 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 HNF4GQ14541 408 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 ADIRFQ15847 76 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 TBR1Q16650 682 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 TGIF2LYQ8IUE0 185 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 OR5B3Q8NH48 314 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 MGST2Q99735 147 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 TMEM204Q9BSN7 226 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 GGTLC1Q9BX51 225 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 SAP30LQ9HAJ7 183 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 SLC35D1Q9NTN3 355 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 OR51B2Q9Y5P1 312 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 PXMP4Q9Y6I8 212 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 DYSFO75923 2080 aa8.56□□□□□ -1.04
PABPC1-224ENST00000610907 J3QR06 171 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 TNFRSF13BO14836 293 aaPredicted RBP8.55□□□□□ -1.04
PABPC1-224ENST00000610907 ATXN7O15265 892 aaPredicted RBP8.55□□□□□ -1.04
PABPC1-224ENST00000610907 APOA2P02652 100 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 PFN1P07737 140 aaKnown RBP8.55□□□□□ -1.04
PABPC1-224ENST00000610907 CD99P14209 185 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 CDX1P47902 265 aaPredicted RBP8.55□□□□□ -1.04
PABPC1-224ENST00000610907 UTF1Q5T230 341 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 LINC00311Q8N616 119 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 ZNF596Q8TC21 504 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 RPUSD4Q96CM3 377 aaKnown RBP8.55□□□□□ -1.04
PABPC1-224ENST00000610907 BTF3L4Q96K17 158 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 ZNF714Q96N38 554 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 OR5B12Q96R08 314 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 PLEKHA3Q9HB20 300 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 DOK5Q9P104 306 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 KAAG1Q9UBP8 84 aa8.55□□□□□ -1.04
PABPC1-224ENST00000610907 ELOA3CA0A087WX78 387 aaPredicted RBP8.54□□□□□ -1.04
PABPC1-224ENST00000610907 INS-IGF2F8WCM5 200 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 H7BYZ3 331 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 K7ENP7 123 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 NDUFB3O43676 98 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 CLN5O75503 358 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 MMP23AO75900 390 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 MT-CO2P00403 227 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 CA2P00918 260 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 GNG10P50151 68 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 RHOBP62745 196 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 C2orf83Q53S99 150 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 LRRC10Q5BKY1 277 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 SPACA3Q8IXA5 215 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 OR5AN1Q8NGI8 311 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 OR4A5Q8NH83 315 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 RND1Q92730 232 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 NEUROG1Q92886 237 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 SSX3Q99909 188 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 C19orf24Q9BVV8 132 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 SRD5A3Q9H8P0 318 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 CHODLQ9H9P2 273 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 TMEM106BQ9NUM4 274 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 PLCE1Q9P212 2302 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 LOC400499M0QZD8 3231 aa8.54□□□□□ -1.04
PABPC1-224ENST00000610907 PCP4L1A6NKN8 68 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 PPP1R2P9O14990 202 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 HIST1H2BKO60814 126 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 TRGC2P03986 189 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 HIST1H2BJP06899 126 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 HIST1H2BOP23527 126 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 HIST1H2BBP33778 126 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 SRP14P37108 136 aaKnown RBP8.53□□□□□ -1.04
PABPC1-224ENST00000610907 HIST1H2BDP58876 126 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 B2MP61769 119 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 HIST1H2BCP62807 126 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 HIST2H2BEQ16778 126 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 TMEM177Q53S58 311 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 ARSJQ5FYB0 599 aaPredicted RBP8.53□□□□□ -1.04
PABPC1-224ENST00000610907 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.53□□□□□ -1.04
PABPC1-224ENST00000610907 RIF1Q5UIP0 2472 aaKnown RBP8.53□□□□□ -1.04
PABPC1-224ENST00000610907 MIC13Q5XKP0 118 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 TMEM200BQ69YZ2 307 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 SPNS3Q6ZMD2 512 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 C16orf82Q7Z2V1 217 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 TMEM144Q7Z5S9 345 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 OR51G1Q8NGK1 321 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 OR1L8Q8NGR8 309 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 GATAD1Q8WUU5 269 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 HIST1H2BHQ93079 126 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 RNASE6Q93091 150 aaKnown RBP8.53□□□□□ -1.04
PABPC1-224ENST00000610907 TMEM186Q96B77 213 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 SNRNP40Q96DI7 357 aaKnown RBP8.53□□□□□ -1.04
PABPC1-224ENST00000610907 C1orf159Q96HA4 380 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 HIST1H2BNQ99877 126 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 HIST1H2BMQ99879 126 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 VKORC1Q9BQB6 163 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 ARL2-SNX15V9GYD0 113 aa8.53□□□□□ -1.04
PABPC1-224ENST00000610907 RAI1Q7Z5J4 1906 aaPredicted RBP8.53□□□□□ -1.04
PABPC1-224ENST00000610907 TEX50A0A1B0GTY4 177 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 NDUFA6P56556 154 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 PRR20EP86478 221 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms