RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 OR52I2Q8NH67 350 aa14.78□□□□□ -0.04
TCF3-219ENST00000610756 B9D2Q9BPU9 175 aa14.78□□□□□ -0.04
TCF3-219ENST00000610756 MIXL1Q9H2W2 232 aa14.78□□□□□ -0.04
TCF3-219ENST00000610756 FAM212BQ9NTI7 297 aaPredicted RBP14.78□□□□□ -0.04
TCF3-219ENST00000610756 CGB1A6NKQ9 187 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 CTDSP2O14595 271 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 DHFRP00374 187 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 TRBV12-3P01733 135 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 CTRB1P17538 263 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 S100GP29377 79 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 LPAR6P43657 344 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 TATDN3Q17R31 274 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 ZNF585BQ52M93 769 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 FAM209BQ5JX69 171 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 CTRB2Q6GPI1 263 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 DMBX1Q8NFW5 382 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 OR6Q1Q8NGQ2 317 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 FCAMRQ8WWV6 532 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 FANCD2OSQ96PS1 177 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 SRSF8Q9BRL6 282 aaKnown RBP14.77□□□□□ -0.04
TCF3-219ENST00000610756 COMMD5Q9GZQ3 224 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 TMEM140Q9NV12 185 aa14.77□□□□□ -0.04
TCF3-219ENST00000610756 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.76□□□□□ -0.05
TCF3-219ENST00000610756 MARCH11A6NNE9 402 aa14.76□□□□□ -0.05
TCF3-219ENST00000610756 RGS5O15539 181 aa14.76□□□□□ -0.05
TCF3-219ENST00000610756 OR2J3O76001 311 aa14.76□□□□□ -0.05
TCF3-219ENST00000610756 MYOD1P15172 320 aa14.76□□□□□ -0.05
TCF3-219ENST00000610756 AREGP15514 252 aa14.76□□□□□ -0.05
TCF3-219ENST00000610756 TBPP20226 339 aa14.76□□□□□ -0.05
TCF3-219ENST00000610756 C15orf32Q32M92 178 aa14.76□□□□□ -0.05
TCF3-219ENST00000610756 SLC38A6Q8IZM9 456 aa14.76□□□□□ -0.05
TCF3-219ENST00000610756 OR9G4Q8NGQ1 327 aa14.76□□□□□ -0.05
TCF3-219ENST00000610756 DYNC2LI1Q8TCX1 351 aa14.76□□□□□ -0.05
TCF3-219ENST00000610756 M0QYG6 137 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 KRASP01116 189 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 CD3DP04234 171 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 IFNA6P05013 189 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 SYNJ2BPP57105 145 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 ERVK-16P61578 105 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 CD69Q07108 199 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 EXOSC2Q13868 293 aaKnown RBP14.75□□□□□ -0.05
TCF3-219ENST00000610756 PHLDA2Q53GA4 152 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 IL34Q6ZMJ4 242 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 FBXL7Q9UJT9 491 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 COL7A1Q02388 2944 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 DNAH9Q9NYC9 4486 aa14.75□□□□□ -0.05
TCF3-219ENST00000610756 GABARAPH6UMI1 98 aa14.74□□□□□ -0.05
TCF3-219ENST00000610756 IGLV1-51P01701 117 aa14.74□□□□□ -0.05
TCF3-219ENST00000610756 SPNP16150 400 aa14.74□□□□□ -0.05
TCF3-219ENST00000610756 HIST1H1BP16401 226 aaKnown RBP14.74□□□□□ -0.05
TCF3-219ENST00000610756 MRPS10P82664 201 aaKnown RBP14.74□□□□□ -0.05
TCF3-219ENST00000610756 RPEL1Q2QD12 228 aa14.74□□□□□ -0.05
TCF3-219ENST00000610756 RNASE10Q5GAN6 216 aaKnown RBP14.74□□□□□ -0.05
TCF3-219ENST00000610756 C19orf35Q6ZS72 473 aa14.74□□□□□ -0.05
TCF3-219ENST00000610756 TBC1D26Q86UD7 250 aa14.74□□□□□ -0.05
TCF3-219ENST00000610756 LHFPL1Q86WI0 220 aa14.74□□□□□ -0.05
TCF3-219ENST00000610756 LAX1Q8IWV1 398 aa14.74□□□□□ -0.05
TCF3-219ENST00000610756 ARRDC1Q8N5I2 433 aa14.74□□□□□ -0.05
TCF3-219ENST00000610756 SIGLEC8Q9NYZ4 499 aa14.74□□□□□ -0.05
TCF3-219ENST00000610756 DMRT1Q9Y5R6 373 aa14.74□□□□□ -0.05
TCF3-219ENST00000610756 TEX50A0A1B0GTY4 177 aa14.73□□□□□ -0.05
TCF3-219ENST00000610756 IGLC7A0M8Q6 106 aa14.73□□□□□ -0.05
TCF3-219ENST00000610756 BMPR1BO00238 502 aa14.73□□□□□ -0.05
TCF3-219ENST00000610756 LY86O95711 162 aa14.73□□□□□ -0.05
TCF3-219ENST00000610756 DEFA4P12838 97 aa14.73□□□□□ -0.05
TCF3-219ENST00000610756 RPA2P15927 270 aa14.73□□□□□ -0.05
TCF3-219ENST00000610756 PTBP1P26599 531 aaKnown RBP eCLIP14.73□□□□□ -0.05
TCF3-219ENST00000610756 SSBP1Q04837 148 aaKnown RBP14.73□□□□□ -0.05
TCF3-219ENST00000610756 RNASE12Q5GAN4 147 aaKnown RBP14.73□□□□□ -0.05
TCF3-219ENST00000610756 THOC7Q6I9Y2 204 aaKnown RBP14.73□□□□□ -0.05
TCF3-219ENST00000610756 TMEM229BQ8NBD8 167 aa14.73□□□□□ -0.05
TCF3-219ENST00000610756 QTRT1Q9BXR0 403 aaKnown RBP14.73□□□□□ -0.05
TCF3-219ENST00000610756 CCDC59Q9P031 241 aaKnown RBP14.73□□□□□ -0.05
TCF3-219ENST00000610756 RABL2AQ9UBK7 228 aaPredicted RBP14.73□□□□□ -0.05
TCF3-219ENST00000610756 RABL2BQ9UNT1 228 aa14.73□□□□□ -0.05
TCF3-219ENST00000610756 SORL1Q92673 2214 aa14.73□□□□□ -0.05
TCF3-219ENST00000610756 NDUFB8O95169 186 aa14.72□□□□□ -0.05
TCF3-219ENST00000610756 CD74P04233 296 aa14.72□□□□□ -0.05
TCF3-219ENST00000610756 TRAPPC2P0DI81 140 aa14.72□□□□□ -0.05
TCF3-219ENST00000610756 TRAPPC2BP0DI82 140 aa14.72□□□□□ -0.05
TCF3-219ENST00000610756 G6PCP35575 357 aa14.72□□□□□ -0.05
TCF3-219ENST00000610756 HSD17B13Q7Z5P4 300 aaPredicted RBP14.72□□□□□ -0.05
TCF3-219ENST00000610756 OR1L8Q8NGR8 309 aa14.72□□□□□ -0.05
TCF3-219ENST00000610756 ZNF486Q96H40 463 aaPredicted RBP14.72□□□□□ -0.05
TCF3-219ENST00000610756 NDUFA4L2Q9NRX3 87 aa14.72□□□□□ -0.05
TCF3-219ENST00000610756 IGLV11-55A0A075B6I3 123 aa14.71□□□□□ -0.05
TCF3-219ENST00000610756 SNAPC5O75971 98 aa14.71□□□□□ -0.05
TCF3-219ENST00000610756 REG1AP05451 166 aa14.71□□□□□ -0.05
TCF3-219ENST00000610756 NHLRC4P0CG21 123 aaPredicted RBP14.71□□□□□ -0.05
TCF3-219ENST00000610756 GP9P14770 177 aa14.71□□□□□ -0.05
TCF3-219ENST00000610756 TAS2R19P59542 299 aa14.71□□□□□ -0.05
TCF3-219ENST00000610756 OR10W1Q8NGF6 305 aa14.71□□□□□ -0.05
TCF3-219ENST00000610756 TERB2Q8NHR7 220 aa14.71□□□□□ -0.05
TCF3-219ENST00000610756 FKBP11Q9NYL4 201 aa14.71□□□□□ -0.05
TCF3-219ENST00000610756 SMAD5-AS1Q9Y6J3 95 aa14.71□□□□□ -0.05
TCF3-219ENST00000610756 H3BMQ9 156 aa14.7□□□□□ -0.06
TCF3-219ENST00000610756 CTDSPLO15194 276 aa14.7□□□□□ -0.06
TCF3-219ENST00000610756 GGCTO75223 188 aaKnown RBP14.7□□□□□ -0.06
TCF3-219ENST00000610756 CSN3P07498 182 aa14.7□□□□□ -0.06
TCF3-219ENST00000610756 RND3P61587 244 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms