RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 PLEKHA2Q9HB19 425 aa9.13□□□□□ -0.95
LINC00539-204ENST00000608957 SLC35D1Q9NTN3 355 aa9.13□□□□□ -0.95
LINC00539-204ENST00000608957 DNAH3Q8TD57 4116 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 IGHV3-72A0A0B4J1Y9 119 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 IGHV1-3A0A0C4DH29 117 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 G3V4G9 280 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 H0YJW9 148 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 OPN1MWP04001 364 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 OPN1MW2P0DN77 364 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 OPN1MW3P0DN78 364 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 SLC25A6P12236 298 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 ARHGDIBP52566 201 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 TAGLNQ01995 201 aaKnown RBP9.12□□□□□ -0.95
LINC00539-204ENST00000608957 IL15RAQ13261 267 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 PDLIM3Q53GG5 364 aaPredicted RBP9.12□□□□□ -0.95
LINC00539-204ENST00000608957 Q5BKY6 102 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 ARSJQ5FYB0 599 aaPredicted RBP9.12□□□□□ -0.95
LINC00539-204ENST00000608957 NDUFA11Q86Y39 141 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 FAM219AQ8IW50 185 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 OR8H3Q8N146 312 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 OR11H4Q8NGC9 324 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 GPR146Q96CH1 333 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 R3HDM4Q96D70 268 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 RRNAD1Q96FB5 475 aaKnown RBP9.12□□□□□ -0.95
LINC00539-204ENST00000608957 NABP2Q9BQ15 211 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 GSKIPQ9P0R6 139 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 MOB4Q9Y3A3 225 aa9.12□□□□□ -0.95
LINC00539-204ENST00000608957 A0A1B0GU03 582 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 MPC2O95563 127 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 CRYZL1O95825 349 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 SCGB1D2O95969 90 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 KRASP01116 189 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 IGKV1D-33P01593 117 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 IGKV1-33P01594 117 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 GAPDHP04406 335 aaKnown RBP9.11□□□□□ -0.95
LINC00539-204ENST00000608957 P0C879 139 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 PET100P0DJ07 73 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 RRASP10301 218 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 TMEM11P17152 192 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 PSMB6P28072 239 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 G6PCP35575 357 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 S100A10P60903 97 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 ERVK-16P61578 105 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 RAB32Q13637 225 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 EBI3Q14213 229 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 HNF4GQ14541 408 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 SMCO1Q147U7 214 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 PDPNQ86YL7 162 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 Q8N6K4 173 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 C5orf56Q8N8D9 126 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 OR5AU1Q8NGC0 362 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 OR5AN1Q8NGI8 311 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 OR4D5Q8NGN0 318 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 GRPEL2Q8TAA5 225 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 WASHC3Q9Y3C0 194 aa9.11□□□□□ -0.95
LINC00539-204ENST00000608957 FXYD6-FXYD2A0A087WZ82 144 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 A0A1W2PRX2 142 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 MARCH11A6NNE9 402 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 H7C2Y5 167 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 FAM106CPP0CH98 169 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 SLC25A4P12235 298 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 NQO2P16083 231 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 HES1Q14469 280 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 IZUMO4Q1ZYL8 232 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 BEAN1Q3B7T3 259 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 C9orf152Q5JTZ5 239 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 SAMD5Q5TGI4 173 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 C11orf87Q6NUJ2 197 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 MOB3BQ86TA1 216 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 DMBX1Q8NFW5 382 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 OR1S1Q8NH92 325 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 THAP6Q8TBB0 222 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 EAF1Q96JC9 268 aaPredicted RBP9.1□□□□□ -0.95
LINC00539-204ENST00000608957 ZFP57Q9NU63 452 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 MBD2Q9UBB5 411 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 CACNG5Q9UF02 275 aa9.1□□□□□ -0.95
LINC00539-204ENST00000608957 LINC01548A6NM66 108 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 HMSDA8MTL9 139 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 K7EPK0 472 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 PITX3O75364 302 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 HRASP01112 189 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 MBPP02686 304 aaPredicted RBP9.09□□□□□ -0.95
LINC00539-204ENST00000608957 IGKV1-16P04430 117 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 MC5RP33032 325 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 NKX2-1P43699 371 aaPredicted RBP9.09□□□□□ -0.95
LINC00539-204ENST00000608957 POU2AF1Q16633 256 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 PRSS54Q6PEW0 395 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 Q6ZRM9 215 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 H2BFWTQ7Z2G1 175 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 CENPVQ7Z7K6 275 aaPredicted RBP9.09□□□□□ -0.95
LINC00539-204ENST00000608957 C9orf62Q8N4C0 152 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 FAM71E2Q8N5Q1 922 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 Q8N9W7 124 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 OSR1Q8TAX0 266 aaPredicted RBP9.09□□□□□ -0.95
LINC00539-204ENST00000608957 NOL4LQ96MY1 436 aaPredicted RBP9.09□□□□□ -0.95
LINC00539-204ENST00000608957 PLSCR3Q9NRY6 295 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 TMEM140Q9NV12 185 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 COA4Q9NYJ1 87 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 LINC00527Q9UJ94 153 aa9.09□□□□□ -0.95
LINC00539-204ENST00000608957 LSM5Q9Y4Y9 91 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms