RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 COMMD9Q9P000 198 aa11.1□□□□□ -0.63
TUBE1-208ENST00000604743 CEPT1Q9Y6K0 416 aa11.1□□□□□ -0.63
TUBE1-208ENST00000604743 GABARAPH6UMI1 98 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 TPPPO94811 219 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 BRI3O95415 125 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 KRASP01116 189 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 ZNF735P0CB33 412 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 AREGP15514 252 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 G6PCP35575 357 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 PPP5CP53041 499 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 TAS2R19P59542 299 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 ATP5G2Q06055 141 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 OR4D10Q8NGI6 311 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 PRR25Q96S07 402 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 COMMD5Q9GZQ3 224 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 SLC2A9Q9NRM0 540 aa11.09□□□□□ -0.63
TUBE1-208ENST00000604743 PEF1Q9UBV8 284 aaKnown RBP11.09□□□□□ -0.63
TUBE1-208ENST00000604743 ZMAT5Q9UDW3 170 aaKnown RBP11.09□□□□□ -0.63
TUBE1-208ENST00000604743 MARCH11A6NNE9 402 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 LY86O95711 162 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 RAB3DO95716 219 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 PI3P19957 117 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 ZP3P21754 424 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 UCP3P55916 312 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 EXOSC2Q13868 293 aaKnown RBP11.08□□□□□ -0.64
TUBE1-208ENST00000604743 POU2AF1Q16633 256 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 SCGB2B2Q4G0G5 96 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 ZNF585BQ52M93 769 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 ZNF343Q6P1L6 599 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 TMEM229BQ8NBD8 167 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 MCFD2Q8NI22 146 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 SLIRPQ9GZT3 109 aaKnown RBP11.08□□□□□ -0.64
TUBE1-208ENST00000604743 ZNF257Q9Y2Q1 563 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 NSG2Q9Y328 171 aa11.08□□□□□ -0.64
TUBE1-208ENST00000604743 TRBV9A0A0B4J1U6 114 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 CGB1A6NKQ9 187 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 FAM223BA6NKX1 122 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 NPIPB5A8MRT5 1133 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 IGHV3-23P01764 117 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 DEFA4P12838 97 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 TBPP20226 339 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 PSMB6P28072 239 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 INSL3P51460 131 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 OR2B8PP59922 312 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 MRPS10P82664 201 aaKnown RBP11.07□□□□□ -0.64
TUBE1-208ENST00000604743 FAAP20Q6NZ36 180 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 STEAP1BQ6NZ63 245 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 ZNF429Q86V71 674 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 FAM223AQ8IWN6 122 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 ARRDC1Q8N5I2 433 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 OR4C12Q96R67 309 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 HINT2Q9BX68 163 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 FBXL7Q9UJT9 491 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 S4R3C0 116 aa11.07□□□□□ -0.64
TUBE1-208ENST00000604743 SNAPC5O75971 98 aa11.06□□□□□ -0.64
TUBE1-208ENST00000604743 CD74P04233 296 aa11.06□□□□□ -0.64
TUBE1-208ENST00000604743 TNFSF8P32971 234 aa11.06□□□□□ -0.64
TUBE1-208ENST00000604743 SYNJ2BPP57105 145 aa11.06□□□□□ -0.64
TUBE1-208ENST00000604743 RPEL1Q2QD12 228 aa11.06□□□□□ -0.64
TUBE1-208ENST00000604743 C15orf32Q32M92 178 aa11.06□□□□□ -0.64
TUBE1-208ENST00000604743 ACSM6Q6P461 480 aa11.06□□□□□ -0.64
TUBE1-208ENST00000604743 HAPLN4Q86UW8 402 aa11.06□□□□□ -0.64
TUBE1-208ENST00000604743 LHFPL1Q86WI0 220 aa11.06□□□□□ -0.64
TUBE1-208ENST00000604743 NECAP1Q8NC96 275 aa11.06□□□□□ -0.64
TUBE1-208ENST00000604743 SMIM4Q8WVI0 70 aa11.06□□□□□ -0.64
TUBE1-208ENST00000604743 TEX50A0A1B0GTY4 177 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 FABP12A6NFH5 140 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 NDUFB8O95169 186 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 DHFRP00374 187 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 CRYGCP07315 174 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 CTRB1P17538 263 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 PIGPP57054 158 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 SSBP1Q04837 148 aaKnown RBP11.05□□□□□ -0.64
TUBE1-208ENST00000604743 CTRB2Q6GPI1 263 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 OR10W1Q8NGF6 305 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 TERB2Q8NHR7 220 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 MARCH1Q8TCQ1 289 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 FANCD2OSQ96PS1 177 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 ELOVL1Q9BW60 279 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 QTRT1Q9BXR0 403 aaKnown RBP11.05□□□□□ -0.64
TUBE1-208ENST00000604743 RABL2AQ9UBK7 228 aaPredicted RBP11.05□□□□□ -0.64
TUBE1-208ENST00000604743 RABL2BQ9UNT1 228 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 ZNF256Q9Y2P7 627 aaPredicted RBP11.05□□□□□ -0.64
TUBE1-208ENST00000604743 OR51B2Q9Y5P1 312 aa11.05□□□□□ -0.64
TUBE1-208ENST00000604743 IGLC7A0M8Q6 106 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 DISC1C4P0D8 188 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 PPP5D1E7EU14 171 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 CTDSPLO15194 276 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 SERPINE2P07093 398 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 TRAPPC2P0DI81 140 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 TRAPPC2BP0DI82 140 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 KLF5Q13887 457 aaPredicted RBP11.04□□□□□ -0.64
TUBE1-208ENST00000604743 MEF2DQ14814 521 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 H2BFWTQ7Z2G1 175 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 OR4C16Q8NGL9 310 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 OR1L8Q8NGR8 309 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 OR13C8Q8NGS7 320 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 MRGPRFQ96AM1 343 aa11.04□□□□□ -0.64
TUBE1-208ENST00000604743 ZNF486Q96H40 463 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms