RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ENY2Q9NPA8 101 aa14.45□□□□□ -0.1
VRK3-225ENST00000601912 PRRC2AP48634 2157 aaKnown RBP14.44□□□□□ -0.1
VRK3-225ENST00000601912 H3BP45 60 aa14.44□□□□□ -0.1
VRK3-225ENST00000601912 IGHV4-38-2P0DP08 117 aa14.44□□□□□ -0.1
VRK3-225ENST00000601912 HOXA1P49639 335 aaPredicted RBP14.44□□□□□ -0.1
VRK3-225ENST00000601912 HNF4GQ14541 408 aa14.44□□□□□ -0.1
VRK3-225ENST00000601912 SPANXN5Q5MJ07 72 aa14.44□□□□□ -0.1
VRK3-225ENST00000601912 EAF1Q96JC9 268 aaPredicted RBP14.44□□□□□ -0.1
VRK3-225ENST00000601912 KIAA1456Q9P272 454 aa14.44□□□□□ -0.1
VRK3-225ENST00000601912 METTL1Q9UBP6 276 aaKnown RBP14.44□□□□□ -0.1
VRK3-225ENST00000601912 NBPF19A0A087WUL8 3843 aa14.44□□□□□ -0.1
VRK3-225ENST00000601912 IGSF23A1L1A6 192 aa14.43□□□□□ -0.1
VRK3-225ENST00000601912 CNTFRP26992 372 aa14.43□□□□□ -0.1
VRK3-225ENST00000601912 RPP30P78346 268 aaKnown RBP14.43□□□□□ -0.1
VRK3-225ENST00000601912 IFITM2Q01629 132 aa14.43□□□□□ -0.1
VRK3-225ENST00000601912 NHLH2Q02577 135 aa14.43□□□□□ -0.1
VRK3-225ENST00000601912 MMDQ15546 238 aa14.43□□□□□ -0.1
VRK3-225ENST00000601912 BRD3OSQ6XYD6 125 aa14.43□□□□□ -0.1
VRK3-225ENST00000601912 MMD2Q8IY49 270 aa14.43□□□□□ -0.1
VRK3-225ENST00000601912 OR1L8Q8NGR8 309 aa14.43□□□□□ -0.1
VRK3-225ENST00000601912 ZNF471Q9BX82 626 aaPredicted RBP14.43□□□□□ -0.1
VRK3-225ENST00000601912 ZNF430Q9H8G1 570 aaPredicted RBP14.43□□□□□ -0.1
VRK3-225ENST00000601912 HEYLQ9NQ87 328 aaPredicted RBP14.43□□□□□ -0.1
VRK3-225ENST00000601912 SIGLEC9Q9Y336 463 aa14.43□□□□□ -0.1
VRK3-225ENST00000601912 FAM96BQ9Y3D0 163 aa14.43□□□□□ -0.1
VRK3-225ENST00000601912 CR1P17927 2039 aa14.43□□□□□ -0.1
VRK3-225ENST00000601912 TEX50A0A1B0GTY4 177 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 ACTL6BO94805 426 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 AVPP01185 164 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 CRYGBP07316 175 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 CD24P25063 80 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 BPIFB3P59826 476 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 EBI3Q14213 229 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 PLGLAQ15195 96 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 THNSL2Q86YJ6 484 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 OR8H1Q8NGG4 311 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 HINT2Q9BX68 163 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 PLEKHA3Q9HB20 300 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 STRAPQ9Y3F4 350 aaKnown RBP14.42□□□□□ -0.1
VRK3-225ENST00000601912 RRHO14718 337 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 NBR2O15453 112 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 CST7O76096 145 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 MAS1LP35410 378 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 SULT1A1P50225 295 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 PRCDQ00LT1 54 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 PRSS8Q16651 343 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 CLEC9AQ6UXN8 241 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 PPP1R27Q86WC6 154 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 NPBQ8NG41 125 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 FBXL17Q9UF56 701 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 ITGB1BP2Q9UKP3 347 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 CREBBPQ92793 2442 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 HECTD1Q9ULT8 2610 aa14.42□□□□□ -0.1
VRK3-225ENST00000601912 OPN1MWP04001 364 aa14.41□□□□□ -0.1
VRK3-225ENST00000601912 OPN1MW2P0DN77 364 aa14.41□□□□□ -0.1
VRK3-225ENST00000601912 OPN1MW3P0DN78 364 aa14.41□□□□□ -0.1
VRK3-225ENST00000601912 TMEM11P17152 192 aa14.41□□□□□ -0.1
VRK3-225ENST00000601912 VDAC2P45880 294 aaPredicted RBP14.41□□□□□ -0.1
VRK3-225ENST00000601912 F2RL1P55085 397 aa14.41□□□□□ -0.1
VRK3-225ENST00000601912 UBA52P62987 128 aaKnown RBP14.41□□□□□ -0.1
VRK3-225ENST00000601912 KLF17Q5JT82 389 aaPredicted RBP14.41□□□□□ -0.1
VRK3-225ENST00000601912 TEX261Q6UWH6 196 aa14.41□□□□□ -0.1
VRK3-225ENST00000601912 SMIM3Q9BZL3 60 aa14.41□□□□□ -0.1
VRK3-225ENST00000601912 FBXL15Q9H469 300 aa14.41□□□□□ -0.1
VRK3-225ENST00000601912 TPSG1Q9NRR2 321 aa14.41□□□□□ -0.1
VRK3-225ENST00000601912 PAIP2BQ9ULR5 123 aaKnown RBP14.41□□□□□ -0.1
VRK3-225ENST00000601912 U3KQ87 197 aa14.41□□□□□ -0.1
VRK3-225ENST00000601912 TNCP24821 2201 aa14.4□□□□□ -0.1
VRK3-225ENST00000601912 A0A0U1RQK1 487 aa14.4□□□□□ -0.1
VRK3-225ENST00000601912 MYOD1P15172 320 aa14.4□□□□□ -0.1
VRK3-225ENST00000601912 EIF5AP63241 154 aaKnown RBP14.4□□□□□ -0.1
VRK3-225ENST00000601912 HBG1P69891 147 aa14.4□□□□□ -0.1
VRK3-225ENST00000601912 HBG2P69892 147 aa14.4□□□□□ -0.1
VRK3-225ENST00000601912 TMEM267Q0VDI3 215 aaPredicted RBP14.4□□□□□ -0.1
VRK3-225ENST00000601912 TMEM14EPQ6UXP3 125 aa14.4□□□□□ -0.1
VRK3-225ENST00000601912 TMEM217Q8N7C4 229 aa14.4□□□□□ -0.1
VRK3-225ENST00000601912 MEGF9Q9H1U4 602 aa14.4□□□□□ -0.1
VRK3-225ENST00000601912 C1RLQ9NZP8 487 aa14.4□□□□□ -0.1
VRK3-225ENST00000601912 CCDC168Q8NDH2 2452 aa14.4□□□□□ -0.11
VRK3-225ENST00000601912 RGS13O14921 159 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 JTBO76095 146 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 SCAF4O95104 1147 aaKnown RBP14.39□□□□□ -0.11
VRK3-225ENST00000601912 NDUFA3O95167 84 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 IFNA10P01566 189 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 IFNA7P01567 189 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 FBP1P09467 338 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 METTL15P1P0C7V9 234 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 PJVKQ0ZLH3 352 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 Q8N6K4 173 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 OR1S2Q8NGQ3 325 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 OR5C1Q8NGR4 320 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 CYTL1Q9NRR1 136 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 NDUFA4L2Q9NRX3 87 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 TET2Q6N021 2002 aaPredicted RBP14.39□□□□□ -0.11
VRK3-225ENST00000601912 ITPR2Q14571 2701 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 BORCS7-ASMTA0A0B4J1R7 106 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 A0A1W2PN81 502 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 NCBP2LA6PVI3 153 aaKnown RBP14.39□□□□□ -0.11
VRK3-225ENST00000601912 SMAD7O15105 426 aaKnown RBP14.39□□□□□ -0.11
VRK3-225ENST00000601912 TPT1P13693 172 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms