RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 MST1LQ2TV78 715 aa8.83□□□□□ -1
LIG1-220ENST00000601091 DHRS13Q6UX07 377 aa8.83□□□□□ -1
LIG1-220ENST00000601091 RAX2Q96IS3 184 aa8.83□□□□□ -1
LIG1-220ENST00000601091 C1QTNF5Q9BXJ0 243 aa8.83□□□□□ -1
LIG1-220ENST00000601091 UQCR10Q9UDW1 63 aa8.83□□□□□ -1
LIG1-220ENST00000601091 CSDC2Q9Y534 153 aaKnown RBP8.83□□□□□ -1
LIG1-220ENST00000601091 A0A0G2JMM0 328 aa8.82□□□□□ -1
LIG1-220ENST00000601091 A0A1W2PPB8 328 aa8.82□□□□□ -1
LIG1-220ENST00000601091 KIR3DP1A8MWS1 328 aa8.82□□□□□ -1
LIG1-220ENST00000601091 TMPRSS2O15393 492 aa8.82□□□□□ -1
LIG1-220ENST00000601091 LYZL6O75951 148 aa8.82□□□□□ -1
LIG1-220ENST00000601091 SERF2P84101 59 aa8.82□□□□□ -1
LIG1-220ENST00000601091 MRGPRGQ86SM5 289 aa8.82□□□□□ -1
LIG1-220ENST00000601091 LRTM2Q8N967 370 aa8.82□□□□□ -1
LIG1-220ENST00000601091 GPR146Q96CH1 333 aa8.82□□□□□ -1
LIG1-220ENST00000601091 UHRF2Q96PU4 802 aa8.82□□□□□ -1
LIG1-220ENST00000601091 MRPL16Q9NX20 251 aaKnown RBP8.82□□□□□ -1
LIG1-220ENST00000601091 JPT1Q9UK76 154 aa8.82□□□□□ -1
LIG1-220ENST00000601091 IGSF23A1L1A6 192 aa8.82□□□□□ -1
LIG1-220ENST00000601091 KLK10O43240 276 aa8.82□□□□□ -1
LIG1-220ENST00000601091 PAX9P55771 341 aa8.82□□□□□ -1
LIG1-220ENST00000601091 OR10G9Q8NGN4 311 aa8.82□□□□□ -1
LIG1-220ENST00000601091 C18orf12Q96KH6 178 aa8.82□□□□□ -1
LIG1-220ENST00000601091 DLL3Q9NYJ7 618 aa8.82□□□□□ -1
LIG1-220ENST00000601091 ANAPC10Q9UM13 185 aa8.82□□□□□ -1
LIG1-220ENST00000601091 PTPRZ1P23471 2315 aaPredicted RBP8.82□□□□□ -1
LIG1-220ENST00000601091 IGKV1-12A0A0C4DH73 117 aa8.82□□□□□ -1
LIG1-220ENST00000601091 KIR2DL5BA0A0G2JN68 375 aa8.82□□□□□ -1
LIG1-220ENST00000601091 KIR2DL5BA0A0G2JPC4 375 aa8.82□□□□□ -1
LIG1-220ENST00000601091 GAGE12HA6NDE8 117 aa8.82□□□□□ -1
LIG1-220ENST00000601091 E9PLN8 166 aa8.82□□□□□ -1
LIG1-220ENST00000601091 TSPAN13O95857 204 aa8.82□□□□□ -1
LIG1-220ENST00000601091 IGKV1D-12P01611 117 aa8.82□□□□□ -1
LIG1-220ENST00000601091 RPS16P62249 146 aaKnown RBP8.82□□□□□ -1
LIG1-220ENST00000601091 KIAA1644Q3SXP7 199 aa8.82□□□□□ -1
LIG1-220ENST00000601091 NRN1LQ496H8 165 aa8.82□□□□□ -1
LIG1-220ENST00000601091 TCTEX1D4Q5JR98 221 aa8.82□□□□□ -1
LIG1-220ENST00000601091 MDP1Q86V88 176 aa8.82□□□□□ -1
LIG1-220ENST00000601091 KIR2DL5AQ8N109 375 aa8.82□□□□□ -1
LIG1-220ENST00000601091 ABHD14AQ9BUJ0 271 aa8.82□□□□□ -1
LIG1-220ENST00000601091 FNDC4Q9H6D8 234 aaPredicted RBP8.82□□□□□ -1
LIG1-220ENST00000601091 PPOXP50336 477 aa8.81□□□□□ -1
LIG1-220ENST00000601091 IGFBP7Q16270 282 aa8.81□□□□□ -1
LIG1-220ENST00000601091 OR10G4Q8NGN3 311 aa8.81□□□□□ -1
LIG1-220ENST00000601091 OR10G7Q8NGN6 311 aa8.81□□□□□ -1
LIG1-220ENST00000601091 OR1L4Q8NGR5 311 aa8.81□□□□□ -1
LIG1-220ENST00000601091 CDX2Q99626 313 aaPredicted RBP8.81□□□□□ -1
LIG1-220ENST00000601091 RSG1Q9BU20 258 aa8.81□□□□□ -1
LIG1-220ENST00000601091 TMEM147Q9BVK8 224 aa8.81□□□□□ -1
LIG1-220ENST00000601091 SLC25A22Q9H936 323 aa8.81□□□□□ -1
LIG1-220ENST00000601091 ICE1Q9Y2F5 2266 aa8.81□□□□□ -1
LIG1-220ENST00000601091 DNAJC13O75165 2243 aa8.81□□□□□ -1
LIG1-220ENST00000601091 TNFSF13O75888 250 aa8.81□□□□□ -1
LIG1-220ENST00000601091 SP1P08047 785 aa8.81□□□□□ -1
LIG1-220ENST00000601091 R4GN57 208 aa8.81□□□□□ -1
LIG1-220ENST00000601091 CHD9Q3L8U1 2897 aa8.81□□□□□ -1
LIG1-220ENST00000601091 IGKV1-27A0A075B6S5 117 aa8.81□□□□□ -1
LIG1-220ENST00000601091 SMIM9A6NGZ8 99 aa8.81□□□□□ -1
LIG1-220ENST00000601091 H0YL77 283 aa8.81□□□□□ -1
LIG1-220ENST00000601091 ACTL6BO94805 426 aa8.81□□□□□ -1
LIG1-220ENST00000601091 RPS23P62266 143 aaKnown RBP8.81□□□□□ -1
LIG1-220ENST00000601091 LYPD6Q86Y78 171 aa8.81□□□□□ -1
LIG1-220ENST00000601091 RBKSQ9H477 322 aa8.81□□□□□ -1
LIG1-220ENST00000601091 ZNF835Q9Y2P0 537 aa8.81□□□□□ -1
LIG1-220ENST00000601091 YLPM1P49750 1951 aaKnown RBP8.81□□□□□ -1
LIG1-220ENST00000601091 BCL2P10415 239 aa8.8□□□□□ -1
LIG1-220ENST00000601091 MBD3L1Q8WWY6 194 aa8.8□□□□□ -1
LIG1-220ENST00000601091 S1PR3Q99500 378 aa8.8□□□□□ -1
LIG1-220ENST00000601091 C20orf144Q9BQM9 153 aa8.8□□□□□ -1
LIG1-220ENST00000601091 NAT8Q9UHE5 227 aa8.8□□□□□ -1
LIG1-220ENST00000601091 WASHC3Q9Y3C0 194 aa8.8□□□□□ -1
LIG1-220ENST00000601091 EML5Q05BV3 1969 aa8.8□□□□□ -1
LIG1-220ENST00000601091 THADAQ6YHU6 1953 aa8.8□□□□□ -1
LIG1-220ENST00000601091 CEP250Q9BV73 2442 aa8.8□□□□□ -1
LIG1-220ENST00000601091 REV3LO60673 3130 aa8.8□□□□□ -1
LIG1-220ENST00000601091 OR2T8A6NH00 312 aa8.8□□□□□ -1
LIG1-220ENST00000601091 SLC25A6P12236 298 aa8.8□□□□□ -1
LIG1-220ENST00000601091 CD33P20138 364 aa8.8□□□□□ -1
LIG1-220ENST00000601091 DEFB123Q8N688 67 aa8.8□□□□□ -1
LIG1-220ENST00000601091 PLPPR2Q96GM1 343 aa8.8□□□□□ -1
LIG1-220ENST00000601091 SAMD10Q9BYL1 202 aa8.8□□□□□ -1
LIG1-220ENST00000601091 AURKAIP1Q9NWT8 199 aaPredicted RBP8.8□□□□□ -1
LIG1-220ENST00000601091 DEFB108AA8MXU0 73 aa8.8□□□□□ -1
LIG1-220ENST00000601091 IZUMO4Q1ZYL8 232 aa8.8□□□□□ -1
LIG1-220ENST00000601091 NDFIP1Q9BT67 221 aa8.8□□□□□ -1
LIG1-220ENST00000601091 HES7Q9BYE0 225 aa8.8□□□□□ -1
LIG1-220ENST00000601091 PRSS50Q9UI38 385 aa8.8□□□□□ -1
LIG1-220ENST00000601091 FRYLO94915 3013 aa8.8□□□□□ -1
LIG1-220ENST00000601091 NCOR1O75376 2440 aa8.8□□□□□ -1
LIG1-220ENST00000601091 OOEPA6NGQ2 149 aa8.8□□□□□ -1
LIG1-220ENST00000601091 ADH4P08319 380 aa8.8□□□□□ -1
LIG1-220ENST00000601091 MBNL2Q5VZF2 373 aaKnown RBP8.8□□□□□ -1
LIG1-220ENST00000601091 FOXL2NBQ6ZUU3 175 aa8.8□□□□□ -1
LIG1-220ENST00000601091 FGFBP3Q8TAT2 258 aa8.8□□□□□ -1
LIG1-220ENST00000601091 SLC25A40Q8TBP6 338 aa8.8□□□□□ -1
LIG1-220ENST00000601091 Q8WTZ3 238 aa8.8□□□□□ -1
LIG1-220ENST00000601091 ZNF665Q9H7R5 613 aa8.8□□□□□ -1
LIG1-220ENST00000601091 FRYQ5TBA9 3013 aa8.79□□□□□ -1
LIG1-220ENST00000601091 MUC22E2RYF6 1773 aaPredicted RBP8.79□□□□□ -1
LIG1-220ENST00000601091 OR2H2O95918 312 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms