RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 P0C879 139 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 S100GP29377 79 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 RPL27AP46776 148 aaKnown RBP13.61□□□□□ -0.23
USHBP1-209ENST00000598570 ZNF45Q02386 682 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 ZNF616Q08AN1 781 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 PHLDA2Q53GA4 152 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 ZNF343Q6P1L6 599 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 SLC25A42Q86VD7 318 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 ZFAND1Q8TCF1 268 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 CASTOR1Q8WTX7 329 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 DUX3Q96PT4 197 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 RTBDNQ9BSG5 229 aaPredicted RBP13.61□□□□□ -0.23
USHBP1-209ENST00000598570 THAP7Q9BT49 309 aaPredicted RBP13.61□□□□□ -0.23
USHBP1-209ENST00000598570 TMEM140Q9NV12 185 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 GPR132Q9UNW8 380 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 ZNF257Q9Y2Q1 563 aa13.61□□□□□ -0.23
USHBP1-209ENST00000598570 PRKDCP78527 4128 aaKnown RBP13.61□□□□□ -0.23
USHBP1-209ENST00000598570 DPPA5A6NC42 116 aa13.6□□□□□ -0.23
USHBP1-209ENST00000598570 CCDC160A6NGH7 325 aa13.6□□□□□ -0.23
USHBP1-209ENST00000598570 B3GALNT1O75752 331 aa13.6□□□□□ -0.23
USHBP1-209ENST00000598570 TRGV3P03979 118 aa13.6□□□□□ -0.23
USHBP1-209ENST00000598570 HSPB1P04792 205 aaKnown RBP13.6□□□□□ -0.23
USHBP1-209ENST00000598570 CTSDP07339 412 aaPredicted RBP13.6□□□□□ -0.23
USHBP1-209ENST00000598570 RPA2P15927 270 aa13.6□□□□□ -0.23
USHBP1-209ENST00000598570 TPPP2P59282 170 aa13.6□□□□□ -0.23
USHBP1-209ENST00000598570 OR4C16Q8NGL9 310 aa13.6□□□□□ -0.23
USHBP1-209ENST00000598570 OR6Q1Q8NGQ2 317 aa13.6□□□□□ -0.23
USHBP1-209ENST00000598570 OR13C8Q8NGS7 320 aa13.6□□□□□ -0.23
USHBP1-209ENST00000598570 MS4A10Q96PG2 267 aa13.6□□□□□ -0.23
USHBP1-209ENST00000598570 GPR61Q9BZJ8 451 aa13.6□□□□□ -0.23
USHBP1-209ENST00000598570 IGLC7A0M8Q6 106 aa13.59□□□□□ -0.23
USHBP1-209ENST00000598570 H0Y980 276 aa13.59□□□□□ -0.23
USHBP1-209ENST00000598570 CTRB1P17538 263 aa13.59□□□□□ -0.23
USHBP1-209ENST00000598570 KLF9Q13886 244 aaPredicted RBP13.59□□□□□ -0.23
USHBP1-209ENST00000598570 CTRB2Q6GPI1 263 aa13.59□□□□□ -0.23
USHBP1-209ENST00000598570 THOC7Q6I9Y2 204 aaKnown RBP13.59□□□□□ -0.23
USHBP1-209ENST00000598570 SSX9Q7RTT3 188 aa13.59□□□□□ -0.23
USHBP1-209ENST00000598570 REC114Q7Z4M0 266 aa13.59□□□□□ -0.23
USHBP1-209ENST00000598570 C1QL4Q86Z23 238 aa13.59□□□□□ -0.23
USHBP1-209ENST00000598570 GDPD1Q8N9F7 314 aa13.59□□□□□ -0.23
USHBP1-209ENST00000598570 FANCD2OSQ96PS1 177 aa13.59□□□□□ -0.23
USHBP1-209ENST00000598570 NDUFA4L2Q9NRX3 87 aa13.59□□□□□ -0.23
USHBP1-209ENST00000598570 TMEM14BQ9NUH8 114 aa13.59□□□□□ -0.23
USHBP1-209ENST00000598570 TEX50A0A1B0GTY4 177 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 FAM223BA6NKX1 122 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 DISC1C4P0D8 188 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 KRASP01116 189 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 PSMB6P28072 239 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 S100A5P33763 92 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 PIGPP57054 158 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 PDLIM3Q53GG5 364 aaPredicted RBP13.58□□□□□ -0.24
USHBP1-209ENST00000598570 FAM223AQ8IWN6 122 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 NECAP1Q8NC96 275 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 MARCH1Q8TCQ1 289 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 PRRT1Q99946 306 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 ALX4Q9H161 411 aaPredicted RBP13.58□□□□□ -0.24
USHBP1-209ENST00000598570 C5orf66Q9H5L9 145 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 DMRT1Q9Y5R6 373 aa13.58□□□□□ -0.24
USHBP1-209ENST00000598570 HMX3A6NHT5 357 aa13.57□□□□□ -0.24
USHBP1-209ENST00000598570 LINC01619G3V211 115 aa13.57□□□□□ -0.24
USHBP1-209ENST00000598570 MYOD1P15172 320 aa13.57□□□□□ -0.24
USHBP1-209ENST00000598570 UCP1P25874 307 aa13.57□□□□□ -0.24
USHBP1-209ENST00000598570 HSD17B13Q7Z5P4 300 aaPredicted RBP13.57□□□□□ -0.24
USHBP1-209ENST00000598570 FYTTD1Q96QD9 318 aaKnown RBP13.57□□□□□ -0.24
USHBP1-209ENST00000598570 TP53RKQ96S44 253 aa13.57□□□□□ -0.24
USHBP1-209ENST00000598570 PHB2Q99623 299 aa13.57□□□□□ -0.24
USHBP1-209ENST00000598570 RANGRFQ9HD47 186 aaPredicted RBP13.57□□□□□ -0.24
USHBP1-209ENST00000598570 HRASLSQ9HDD0 168 aa13.57□□□□□ -0.24
USHBP1-209ENST00000598570 AKIP1Q9NQ31 210 aa13.57□□□□□ -0.24
USHBP1-209ENST00000598570 IGHV4OR15-8A0A075B7B6 117 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 A0A087WW49 117 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 AREGP15514 252 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 PI3P19957 117 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 G6PCP35575 357 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 KRTAP10-11P60412 298 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 ERVK-16P61578 105 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 KLF5Q13887 457 aaPredicted RBP13.56□□□□□ -0.24
USHBP1-209ENST00000598570 AARDQ4LEZ3 155 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 FAAP20Q6NZ36 180 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 Q8N402 240 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 DMBX1Q8NFW5 382 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 OR51S1Q8NGJ8 323 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 OR5B3Q8NH48 314 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 OR5B12Q96R08 314 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 QTRT1Q9BXR0 403 aaKnown RBP13.56□□□□□ -0.24
USHBP1-209ENST00000598570 COMMD5Q9GZQ3 224 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 SRRQ9GZT4 340 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 COA4Q9NYJ1 87 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 FKBP11Q9NYL4 201 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 PRNDQ9UKY0 176 aa13.56□□□□□ -0.24
USHBP1-209ENST00000598570 IGLV11-55A0A075B6I3 123 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 C3orf85A0A1B0GTC6 90 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 C13orf42A0A1B0GVH6 325 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 A6NHS1 94 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 CDS2O95674 445 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 IGKV1-5P01602 117 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 IGHV3-11P01762 117 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 APELAP0DMC3 54 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 PGAM2P15259 253 aa13.55□□□□□ -0.24
USHBP1-209ENST00000598570 INSL3P51460 131 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms