RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 PRELID3BQ9Y3B1 194 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 V9GYH0 126 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 DNAH7Q8WXX0 4024 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 SULT1C2O00338 296 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 MPPED1O15442 326 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 NDUFB8O95169 186 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 TRAPPC2P0DI81 140 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 TRAPPC2BP0DI82 140 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 IGHV4-30-4P0DP06 118 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 ARPC4P59998 168 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 ASAH1Q13510 395 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 OR4A47Q6IF82 309 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 TMEM17Q86X19 198 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 LAX1Q8IWV1 398 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 MMD2Q8IY49 270 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 TTC9CQ8N5M4 171 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 OR4S2Q8NH73 311 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 TMEM167AQ8TBQ9 72 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 CACNG8Q8WXS5 425 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 KCTD12Q96CX2 325 aaKnown RBP8.09□□□□□ -1.11
VRK3-214ENST00000598553 DIRAS2Q96HU8 199 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 USMG5Q96IX5 58 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 RCHY1Q96PM5 261 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 SDHCQ99643 169 aaPredicted RBP8.09□□□□□ -1.11
VRK3-214ENST00000598553 SLC5A7Q9GZV3 580 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 WFDC10AQ9H1F0 79 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 ANAPC10Q9UM13 185 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 NBEAL2Q6ZNJ1 2754 aa8.09□□□□□ -1.11
VRK3-214ENST00000598553 FAM223BA6NKX1 122 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 TMEM127O75204 238 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 ACTL6BO94805 426 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 OR2A4O95047 310 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 S1PR2O95136 353 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 ZNF735P0CB33 412 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 IL7P13232 177 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 RPL27AP46776 148 aaKnown RBP8.08□□□□□ -1.12
VRK3-214ENST00000598553 RFX2P48378 723 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 MECP2P51608 486 aaKnown RBP8.08□□□□□ -1.12
VRK3-214ENST00000598553 TAS2R20P59543 309 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 MSMO1Q15800 293 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 MZT2BQ6NZ67 158 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 ZNF66Q6ZN08 573 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 FAM223AQ8IWN6 122 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 OR51H1Q8NH63 302 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 OR2A7Q96R45 310 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 SPIN2AQ99865 258 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 SPIN2BQ9BPZ2 258 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 C19orf73Q9NVV2 129 aa8.08□□□□□ -1.12
VRK3-214ENST00000598553 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.07□□□□□ -1.12
VRK3-214ENST00000598553 MFSD2BA6NFX1 497 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 XRCC3O43542 346 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 PMP2P02689 132 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 GNRHRP30968 328 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 RPEL1Q2QD12 228 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 C15orf32Q32M92 178 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 PYDC2Q56P42 97 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 UBE2NLQ5JXB2 153 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 TRIQKQ629K1 86 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 SPAG16Q8N0X2 631 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 SAMD12Q8N8I0 201 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 VSTM2AQ8TAG5 236 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 MIXL1Q9H2W2 232 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 RETNQ9HD89 108 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 ZC4H2Q9NQZ6 224 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 DIABLOQ9NR28 239 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 EHFQ9NZC4 300 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 RABL2AQ9UBK7 228 aaPredicted RBP8.07□□□□□ -1.12
VRK3-214ENST00000598553 TBC1D24Q9ULP9 559 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 RABL2BQ9UNT1 228 aa8.07□□□□□ -1.12
VRK3-214ENST00000598553 RYR3Q15413 4870 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 IGLC7A0M8Q6 106 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 OR2C1O95371 312 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 CTRB1P17538 263 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 KIR2DS2P43631 304 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 CBX5P45973 191 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 MFAP2P55001 183 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 OR2B8PP59922 312 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 ATP5G2Q06055 141 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 ZNF79Q15937 498 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 RNASE12Q5GAN4 147 aaKnown RBP8.06□□□□□ -1.12
VRK3-214ENST00000598553 CTRB2Q6GPI1 263 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 CLEC19AQ6UXS0 136 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 SLC25A42Q86VD7 318 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 OR5AP2Q8NGF4 316 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 OR10W1Q8NGF6 305 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 ZNF414Q96IQ9 312 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 SOSTQ9BQB4 213 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 SLC2A9Q9NRM0 540 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 FBXL7Q9UJT9 491 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 ZNF257Q9Y2Q1 563 aa8.06□□□□□ -1.12
VRK3-214ENST00000598553 IGLV11-55A0A075B6I3 123 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 DBX1A6NMT0 343 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 NPIPB5A8MRT5 1133 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 UPK2O00526 184 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 CCNKO75909 580 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 HRASP01112 189 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 RLN1P04808 185 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 CRYGCP07315 174 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 CD7P09564 240 aa8.05□□□□□ -1.12
VRK3-214ENST00000598553 HLA-GP17693 338 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms