RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ZNF616Q08AN1 781 aa13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 DEFB136Q30KP8 78 aa13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 ZNF585BQ52M93 769 aa13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 CCDC190Q86UF4 302 aa13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 Q8N402 240 aa13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 OR4C16Q8NGL9 310 aa13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 USMG5Q96IX5 58 aa13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 SCGB3A2Q96PL1 93 aa13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 DUX3Q96PT4 197 aa13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 OR5B12Q96R08 314 aa13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 TSC22D3Q99576 134 aa13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 C14orf166Q9Y224 244 aaKnown RBP13.42□□□□□ -0.26
SHKBP1-212ENST00000596163 ATG12O94817 140 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 DHFRP00374 187 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 KRASP01116 189 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 APELAP0DMC3 54 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 DEFA6Q01524 100 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 OXLD1Q5BKU9 147 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 C10orf55Q5SWW7 151 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 C1QL4Q86Z23 238 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 ADAD2Q8NCV1 583 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 OR13C8Q8NGS7 320 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 MARCH1Q8TCQ1 289 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 FKBP11Q9NYL4 201 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 ZNF257Q9Y2Q1 563 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 V9GYH0 126 aa13.41□□□□□ -0.26
SHKBP1-212ENST00000596163 CMYA5Q8N3K9 4069 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 H0Y980 276 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 HSPB1P04792 205 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 PI3P19957 117 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 ETV6P41212 452 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 FHL3Q13643 280 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 THOC7Q6I9Y2 204 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 FAAP20Q6NZ36 180 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 TOMM5Q8N4H5 51 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 OR6Q1Q8NGQ2 317 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 DEDD2Q8WXF8 326 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 SRSF8Q9BRL6 282 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 MCUBQ9NWR8 336 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 SLC2A8Q9NY64 477 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 PLXNB1O43157 2135 aa13.4□□□□□ -0.26
SHKBP1-212ENST00000596163 TRAV3A0A0B4J244 114 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 C3orf85A0A1B0GTC6 90 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 HMX3A6NHT5 357 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 FAM223BA6NKX1 122 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 NPIPB5A8MRT5 1133 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 TEX22C9J3V5 150 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 LINC01619G3V211 115 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 IGHV3-11P01762 117 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 G6PCP35575 357 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 BEAN1Q3B7T3 259 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 KPRPQ5T749 579 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 H2BFWTQ7Z2G1 175 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 HSD17B13Q7Z5P4 300 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 FAM223AQ8IWN6 122 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 OR51S1Q8NGJ8 323 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 RANGRFQ9HD47 186 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 ZMAT5Q9UDW3 170 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 PRNDQ9UKY0 176 aa13.39□□□□□ -0.27
SHKBP1-212ENST00000596163 TRAPPC2P0DI81 140 aa13.38□□□□□ -0.27
SHKBP1-212ENST00000596163 TRAPPC2BP0DI82 140 aa13.38□□□□□ -0.27
SHKBP1-212ENST00000596163 HIST1H1BP16401 226 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-212ENST00000596163 OR2B8PP59922 312 aa13.38□□□□□ -0.27
SHKBP1-212ENST00000596163 ATP5G2Q06055 141 aa13.38□□□□□ -0.27
SHKBP1-212ENST00000596163 OR1L8Q8NGR8 309 aa13.38□□□□□ -0.27
SHKBP1-212ENST00000596163 GPR132Q9UNW8 380 aa13.38□□□□□ -0.27
SHKBP1-212ENST00000596163 TEX13DA0A0J9YY54 714 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 E7EUB6 86 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 CYB5BO43169 146 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 CRYGCP07315 174 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 DEFA4P12838 97 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 PSMB6P28072 239 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 INPP1P49441 399 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 RHOGP84095 191 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 FAM209BQ5JX69 171 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 GDPD1Q8N9F7 314 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 NECAP1Q8NC96 275 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 OR4A16Q8NH70 328 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 SEC22AQ96IW7 307 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 QTRT1Q9BXR0 403 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 ALX4Q9H161 411 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 OR51B2Q9Y5P1 312 aa13.37□□□□□ -0.27
SHKBP1-212ENST00000596163 TRBV9A0A0B4J1U6 114 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 TEX50A0A1B0GTY4 177 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 ZP3P21754 424 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 DHODHQ02127 395 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 KLF9Q13886 244 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 ZNF79Q15937 498 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 TRIM16LQ309B1 348 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 C9orf66Q5T8R8 295 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 REC114Q7Z4M0 266 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 OR5B3Q8NH48 314 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 TRIM63Q969Q1 353 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 MRGPRFQ96AM1 343 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 TMEM56Q96MV1 263 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 RTBDNQ9BSG5 229 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 KCNIP3Q9Y2W7 256 aa13.36□□□□□ -0.27
SHKBP1-212ENST00000596163 IGHV4OR15-8A0A075B7B6 117 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 A0A087WW49 117 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 PRH1P02810 166 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms