RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 VSTM2AQ8TAG5 236 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 MARCH1Q8TCQ1 289 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 RCC1LQ96I51 464 aaKnown RBP8.6□□□□□ -1.03
VRK3-210ENST00000596121 RTBDNQ9BSG5 229 aaPredicted RBP8.6□□□□□ -1.03
VRK3-210ENST00000596121 THAP7Q9BT49 309 aaPredicted RBP8.6□□□□□ -1.03
VRK3-210ENST00000596121 SLA2Q9H6Q3 261 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 HRASLSQ9HDD0 168 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 ZNF355PQ9NSJ1 428 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 COA4Q9NYJ1 87 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 COMMD9Q9P000 198 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 RABL2AQ9UBK7 228 aaPredicted RBP8.6□□□□□ -1.03
VRK3-210ENST00000596121 RABL2BQ9UNT1 228 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 NSG2Q9Y328 171 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 TRBV9A0A0B4J1U6 114 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 TEX50A0A1B0GTY4 177 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 MARCH11A6NNE9 402 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 ACTL6BO94805 426 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 TRBV12-3P01733 135 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 AKAIN1P0CW23 69 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 PGAM2P15259 253 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 SLURP1P55000 103 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 PIGPP57054 158 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 RND3P61587 244 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 DMBX1Q8NFW5 382 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 OR51S1Q8NGJ8 323 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 OR6Q1Q8NGQ2 317 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 DCUN1D4Q92564 292 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 DLX4Q92988 240 aaPredicted RBP8.59□□□□□ -1.03
VRK3-210ENST00000596121 TRIM63Q969Q1 353 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 SEC22AQ96IW7 307 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 TP53RKQ96S44 253 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 SPIN2AQ99865 258 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 SPIN2BQ9BPZ2 258 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 AKIP1Q9NQ31 210 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 DMRT1Q9Y5R6 373 aa8.59□□□□□ -1.03
VRK3-210ENST00000596121 IGLC7A0M8Q6 106 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 CREBL2O60519 120 aaPredicted RBP8.58□□□□□ -1.04
VRK3-210ENST00000596121 REG1AP05451 166 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 CRYGCP07315 174 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 CTSDP07339 412 aaPredicted RBP8.58□□□□□ -1.04
VRK3-210ENST00000596121 PTBP1P26599 531 aaKnown RBP eCLIP8.58□□□□□ -1.04
VRK3-210ENST00000596121 RHOGP84095 191 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 ZNF616Q08AN1 781 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 KLF9Q13886 244 aaPredicted RBP8.58□□□□□ -1.04
VRK3-210ENST00000596121 MEF2DQ14814 521 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 IZUMO4Q1ZYL8 232 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 SP6Q3SY56 376 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 PDLIM3Q53GG5 364 aaPredicted RBP8.58□□□□□ -1.04
VRK3-210ENST00000596121 PYDC2Q56P42 97 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 OR10W1Q8NGF6 305 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 ZNF486Q96H40 463 aaPredicted RBP8.58□□□□□ -1.04
VRK3-210ENST00000596121 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 C5orf66Q9H5L9 145 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 GPR132Q9UNW8 380 aa8.58□□□□□ -1.04
VRK3-210ENST00000596121 C13orf42A0A1B0GVH6 325 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 ANKRD34BA5PLL1 514 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 NPIPB5A8MRT5 1133 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 DISC1C4P0D8 188 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 LINC01619G3V211 115 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 OR2J3O76001 311 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 NDUFB8O95169 186 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 IGKV1-5P01602 117 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 HSPB1P04792 205 aaKnown RBP8.57□□□□□ -1.04
VRK3-210ENST00000596121 P0C879 139 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 CTRB1P17538 263 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 PSMB6P28072 239 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 CD40LGP29965 261 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 ETV6P41212 452 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 EGFEM1PQ0D2K5 195 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 KLK9Q2XQG4 91 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 CTRB2Q6GPI1 263 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 ZNF343Q6P1L6 599 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 CADM3Q8N126 398 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 Q8N402 240 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 SDHCQ99643 169 aaPredicted RBP8.57□□□□□ -1.04
VRK3-210ENST00000596121 AIFM2Q9BRQ8 373 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 BATF3Q9NR55 127 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 FAM212BQ9NTI7 297 aaPredicted RBP8.57□□□□□ -1.04
VRK3-210ENST00000596121 AURKAIP1Q9NWT8 199 aaPredicted RBP8.57□□□□□ -1.04
VRK3-210ENST00000596121 KLK9Q9UKQ9 250 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 TGP01266 2768 aa8.57□□□□□ -1.04
VRK3-210ENST00000596121 A0A0G2JRQ6 117 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 C3orf85A0A1B0GTC6 90 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 H0Y980 276 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 DUS4LO95620 317 aaKnown RBP8.56□□□□□ -1.04
VRK3-210ENST00000596121 OR8U8P0C7N1 319 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 S100A5P33763 92 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 MFAP2P55001 183 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 ERVK-16P61578 105 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 WT1-ASQ06250 92 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 LHFPL5Q8TAF8 219 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 ZFAND1Q8TCF1 268 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 DPF1Q92782 380 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 TMEM230Q96A57 120 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 SRRQ9GZT4 340 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 NDUFA4L2Q9NRX3 87 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 TMEM14BQ9NUH8 114 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 SLC2A8Q9NY64 477 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 ZNF257Q9Y2Q1 563 aa8.56□□□□□ -1.04
VRK3-210ENST00000596121 IGLV11-55A0A075B6I3 123 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms