RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 YTHDF2Q9Y5A9 579 aaKnown RBP12.67□□□□□ -0.38
ZNF541-205ENST00000595558 TMPRSS2O15393 492 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 PDE6DO43924 150 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 IGHG3P01860 377 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 ADMP35318 185 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 HLA-DRB5Q30154 266 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 PRAMEF5Q5TYX0 476 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 OCC1Q8TAD7 63 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 STARD4Q96DR4 205 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 HSD17B10Q99714 261 aaKnown RBP12.66□□□□□ -0.38
ZNF541-205ENST00000595558 SLC17A3O00476 420 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 FOXH1O75593 365 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 GPR12P47775 334 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 LCN2P80188 198 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 SEPSECSQ9HD40 501 aaKnown RBP12.66□□□□□ -0.38
ZNF541-205ENST00000595558 KCNIP2Q9NS61 270 aa12.66□□□□□ -0.38
ZNF541-205ENST00000595558 M0R1X1 148 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 OR2Z1Q8NG97 314 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 GGTLC1Q9BX51 225 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 CXXC4Q9H2H0 198 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 FKBP11Q9NYL4 201 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 GNG12Q9UBI6 72 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 TP53TG3Q9ULZ0 132 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 POLR3KQ9Y2Y1 108 aaPredicted RBP12.65□□□□□ -0.38
ZNF541-205ENST00000595558 IGHV1-18A0A0C4DH31 117 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 PRSS46E5RG02 174 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 F6UZH7 168 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 MYOD1P15172 320 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 CBLN1P23435 193 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 GUSBP1Q15486 140 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 TDRG1Q3Y452 100 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 LRRC29Q8WV35 223 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 SNHG12Q9BXW3 62 aa12.65□□□□□ -0.38
ZNF541-205ENST00000595558 ABCA4P78363 2273 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 K7EN84 100 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 GFRA3O60609 400 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 IGKV3-15P01624 115 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 HOXC12P31275 282 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 VDAC2P45880 294 aaPredicted RBP12.64□□□□□ -0.39
ZNF541-205ENST00000595558 INO80CQ6PI98 192 aaPredicted RBP12.64□□□□□ -0.39
ZNF541-205ENST00000595558 OR4A16Q8NH70 328 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 LURAP1Q96LR2 239 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 SH3BGRL2Q9UJC5 107 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 TP53TG5Q9Y2B4 290 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 TRAV17A0A0B4J275 112 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 STAG3L2P0CL84 134 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 STAG3L3P0CL85 134 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 PDLIM3Q53GG5 364 aaPredicted RBP12.64□□□□□ -0.39
ZNF541-205ENST00000595558 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
ZNF541-205ENST00000595558 PRR7Q8TB68 274 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 NCOR2Q9Y618 2525 aa12.64□□□□□ -0.39
ZNF541-205ENST00000595558 IGHV2OR16-5A0A0B4J2B6 119 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 F2Z2F3 143 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 SPINT2O43291 252 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 PRDX2P32119 198 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 LINC00310P59036 64 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 RAB4BP61018 213 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 FOXL1Q12952 345 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 IQCJQ1A5X6 159 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 MORN2Q502X0 79 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 ZNRF1Q8ND25 227 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 RAB1CQ92928 201 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 FAM122AQ96E09 287 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 IGKV1D-17A0A075B6S4 117 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.63□□□□□ -0.39
ZNF541-205ENST00000595558 MDFIC2A0A1B0GVS7 189 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 TIMP3P35625 211 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 RELBQ01201 579 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 ARSJQ5FYB0 599 aaPredicted RBP12.63□□□□□ -0.39
ZNF541-205ENST00000595558 BEND2Q8NDZ0 799 aa12.63□□□□□ -0.39
ZNF541-205ENST00000595558 HPRT1P00492 218 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 CD99P14209 185 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 KITLGP21583 273 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 CCKARP32238 428 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 OPRK1P41145 380 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 SPCS3P61009 180 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 ZNF474Q6S9Z5 364 aaPredicted RBP12.62□□□□□ -0.39
ZNF541-205ENST00000595558 MS4A10Q96PG2 267 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 ZNF71Q9NQZ8 489 aaPredicted RBP12.62□□□□□ -0.39
ZNF541-205ENST00000595558 MAP1AP78559 2803 aaPredicted RBP12.62□□□□□ -0.39
ZNF541-205ENST00000595558 AHRRA9YTQ3 701 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 M0R1B8 84 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 TCAPO15273 167 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 RPL31P62899 125 aaKnown RBP12.62□□□□□ -0.39
ZNF541-205ENST00000595558 SMIM21Q3B7S5 101 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 FAM90A1Q86YD7 464 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 ZCCHC24Q8N2G6 241 aaKnown RBP12.62□□□□□ -0.39
ZNF541-205ENST00000595558 TCTEX1D1Q8N7M0 179 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 TMEM140Q9NV12 185 aa12.62□□□□□ -0.39
ZNF541-205ENST00000595558 TCF15Q12870 199 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 OR5I1Q13606 314 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 ZNF718Q3SXZ3 478 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 NAGKQ9UJ70 344 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 PRR33A8MZF0 331 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 SPRY3O43610 288 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 IL6RP08887 468 aaPredicted RBP12.61□□□□□ -0.39
ZNF541-205ENST00000595558 NUTF2P61970 127 aaKnown RBP12.61□□□□□ -0.39
ZNF541-205ENST00000595558 HTD2P86397 168 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 OR10G8Q8NGN5 311 aa12.61□□□□□ -0.39
ZNF541-205ENST00000595558 IFI27L2Q9H2X8 130 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms