RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TMEM229BQ8NBD8 167 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 DPF1Q92782 380 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 GPR61Q9BZJ8 451 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 HRASLSQ9HDD0 168 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 AKIP1Q9NQ31 210 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 SLC2A9Q9NRM0 540 aa8.45□□□□□ -1.06
SHKBP1-206ENST00000595523 A0A0G2JLM5 398 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 C13orf42A0A1B0GVH6 325 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 NPIPB5A8MRT5 1133 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 OVOL1O14753 267 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 IGKV1-39P01597 117 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 IGKV1D-39P04432 117 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 FGF2P09038 288 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 PI3P19957 117 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 TNFSF8P32971 234 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 TAS2R19P59542 299 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 RHOGP84095 191 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 SSBP1Q04837 148 aaKnown RBP8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 IL18Q14116 193 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 KLK9Q2XQG4 91 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 C9orf66Q5T8R8 295 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 STEAP1BQ6NZ63 245 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 LPCAT3Q6P1A2 487 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 ZNF343Q6P1L6 599 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 SLC38A6Q8IZM9 456 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 MCFD2Q8NI22 146 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 MRAPQ8TCY5 172 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 FYTTD1Q96QD9 318 aaKnown RBP8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 AIFM2Q9BRQ8 373 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 KLK9Q9UKQ9 250 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 ZNF257Q9Y2Q1 563 aa8.44□□□□□ -1.06
SHKBP1-206ENST00000595523 IGLC7A0M8Q6 106 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 ANKRD34BA5PLL1 514 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 GSTZ1O43708 216 aaPredicted RBP8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 RAB3DO95716 219 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 KRASP01116 189 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 IFNA6P05013 189 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 CRYGCP07315 174 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 CTRB1P17538 263 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 PSMB6P28072 239 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 G6PCP35575 357 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 PPP5CP53041 499 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 RND3P61587 244 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 CTRB2Q6GPI1 263 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 DMBX1Q8NFW5 382 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 SEC22AQ96IW7 307 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 USMG5Q96IX5 58 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 FANCD2OSQ96PS1 177 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 RANGRFQ9HD47 186 aaPredicted RBP8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 FAM212BQ9NTI7 297 aaPredicted RBP8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 RSL24D1Q9UHA3 163 aaKnown RBP8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 DMRT1Q9Y5R6 373 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 STAB2Q8WWQ8 2551 aa8.43□□□□□ -1.06
SHKBP1-206ENST00000595523 CCDC160A6NGH7 325 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 FAM223BA6NKX1 122 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 DBX1A6NMT0 343 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 ZNF701M0R085 212 aaPredicted RBP8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 OR2J3O76001 311 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 REG1AP05451 166 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 PGAM2P15259 253 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 PTBP1P26599 531 aaKnown RBP eCLIP8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 ERVK-16P61578 105 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 EXOSC2Q13868 293 aaKnown RBP8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 SCGB2B2Q4G0G5 96 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 ACSM6Q6P461 480 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 SLC25A42Q86VD7 318 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 FAM223AQ8IWN6 122 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 CADM3Q8N126 398 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 NECAP1Q8NC96 275 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 OR10W1Q8NGF6 305 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 OR4C16Q8NGL9 310 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 OR13C8Q8NGS7 320 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 TERB2Q8NHR7 220 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 MARCH1Q8TCQ1 289 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 ZNF486Q96H40 463 aaPredicted RBP8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 TP53RKQ96S44 253 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 RABL2AQ9UBK7 228 aaPredicted RBP8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 PEF1Q9UBV8 284 aaKnown RBP8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 RABL2BQ9UNT1 228 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 NSG2Q9Y328 171 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 V9GYH0 126 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 TENM3Q9P273 2699 aa8.42□□□□□ -1.06
SHKBP1-206ENST00000595523 IGLV11-55A0A075B6I3 123 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 TEX50A0A1B0GTY4 177 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 ANKRD20A5PA0PJZ0 165 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 FABP12A6NFH5 140 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 BMPR1BO00238 502 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 NDUFB8O95169 186 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 PIGPP57054 158 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 ATP5G2Q06055 141 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 WT1-ASQ06250 92 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 KLF5Q13887 457 aaPredicted RBP8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 MEF2DQ14814 521 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 ZNF79Q15937 498 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 C15orf32Q32M92 178 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 IL34Q6ZMJ4 242 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 QTRT1Q9BXR0 403 aaKnown RBP8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 COMMD5Q9GZQ3 224 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 NDUFA4L2Q9NRX3 87 aa8.41□□□□□ -1.06
SHKBP1-206ENST00000595523 FBXL7Q9UJT9 491 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms