RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 HMX3A6NHT5 357 aa16.96■□□□□ 0.31
HOMER3-206ENST00000594439 MARCH11A6NNE9 402 aa16.96■□□□□ 0.31
HOMER3-206ENST00000594439 IGHV3-11P01762 117 aa16.96■□□□□ 0.31
HOMER3-206ENST00000594439 PTBP1P26599 531 aaKnown RBP eCLIP16.96■□□□□ 0.31
HOMER3-206ENST00000594439 PIGPP57054 158 aa16.96■□□□□ 0.31
HOMER3-206ENST00000594439 ERVK-16P61578 105 aa16.96■□□□□ 0.31
HOMER3-206ENST00000594439 PYDC2Q56P42 97 aa16.96■□□□□ 0.31
HOMER3-206ENST00000594439 CADM3Q8N126 398 aa16.96■□□□□ 0.31
HOMER3-206ENST00000594439 TTC9CQ8N5M4 171 aa16.96■□□□□ 0.31
HOMER3-206ENST00000594439 OR6Q1Q8NGQ2 317 aa16.96■□□□□ 0.31
HOMER3-206ENST00000594439 ZFAND1Q8TCF1 268 aa16.96■□□□□ 0.31
HOMER3-206ENST00000594439 MARCH1Q8TCQ1 289 aa16.96■□□□□ 0.31
HOMER3-206ENST00000594439 FYTTD1Q96QD9 318 aaKnown RBP16.96■□□□□ 0.31
HOMER3-206ENST00000594439 CGB1A6NKQ9 187 aa16.95■□□□□ 0.3
HOMER3-206ENST00000594439 KRASP01116 189 aa16.95■□□□□ 0.3
HOMER3-206ENST00000594439 FGF2P09038 288 aa16.95■□□□□ 0.3
HOMER3-206ENST00000594439 G6PCP35575 357 aa16.95■□□□□ 0.3
HOMER3-206ENST00000594439 ETV6P41212 452 aa16.95■□□□□ 0.3
HOMER3-206ENST00000594439 TRIM63Q969Q1 353 aa16.95■□□□□ 0.3
HOMER3-206ENST00000594439 RBMXL2O75526 392 aaKnown RBP16.94■□□□□ 0.3
HOMER3-206ENST00000594439 DUS4LO95620 317 aaKnown RBP16.94■□□□□ 0.3
HOMER3-206ENST00000594439 IGKV1-39P01597 117 aa16.94■□□□□ 0.3
HOMER3-206ENST00000594439 IGKV1D-39P04432 117 aa16.94■□□□□ 0.3
HOMER3-206ENST00000594439 CTSDP07339 412 aaPredicted RBP16.94■□□□□ 0.3
HOMER3-206ENST00000594439 RAB25P57735 213 aa16.94■□□□□ 0.3
HOMER3-206ENST00000594439 OR2B8PP59922 312 aa16.94■□□□□ 0.3
HOMER3-206ENST00000594439 DEFA5Q01523 94 aa16.94■□□□□ 0.3
HOMER3-206ENST00000594439 ZNF616Q08AN1 781 aa16.94■□□□□ 0.3
HOMER3-206ENST00000594439 OR51S1Q8NGJ8 323 aa16.94■□□□□ 0.3
HOMER3-206ENST00000594439 SLC2A8Q9NY64 477 aa16.94■□□□□ 0.3
HOMER3-206ENST00000594439 PRH1P02810 166 aa16.93■□□□□ 0.3
HOMER3-206ENST00000594439 OR8U8P0C7N1 319 aa16.93■□□□□ 0.3
HOMER3-206ENST00000594439 ECI1P42126 302 aa16.93■□□□□ 0.3
HOMER3-206ENST00000594439 ZNF45Q02386 682 aa16.93■□□□□ 0.3
HOMER3-206ENST00000594439 SURF2Q15527 256 aaPredicted RBP16.93■□□□□ 0.3
HOMER3-206ENST00000594439 SLC25A42Q86VD7 318 aa16.93■□□□□ 0.3
HOMER3-206ENST00000594439 Q8N402 240 aa16.93■□□□□ 0.3
HOMER3-206ENST00000594439 CCDC71LQ8N9Z2 235 aa16.93■□□□□ 0.3
HOMER3-206ENST00000594439 SEC22AQ96IW7 307 aa16.93■□□□□ 0.3
HOMER3-206ENST00000594439 PRRT1Q99946 306 aa16.93■□□□□ 0.3
HOMER3-206ENST00000594439 IGHV4OR15-8A0A075B7B6 117 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 A0A087WW49 117 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 TRBV9A0A0B4J1U6 114 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 A0A0G2JLM5 398 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 C13orf42A0A1B0GVH6 325 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 NPIPB5A8MRT5 1133 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 H0Y980 276 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 AREGP15514 252 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 KLF9Q13886 244 aaPredicted RBP16.92■□□□□ 0.3
HOMER3-206ENST00000594439 SPANXN2Q5MJ10 180 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 DPF1Q92782 380 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 TP53RKQ96S44 253 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 RTBDNQ9BSG5 229 aaPredicted RBP16.92■□□□□ 0.3
HOMER3-206ENST00000594439 MCRIP2Q9BUT9 160 aaKnown RBP16.92■□□□□ 0.3
HOMER3-206ENST00000594439 COMMD5Q9GZQ3 224 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 COPZ2Q9P299 210 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 ZNF257Q9Y2Q1 563 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 DNAH3Q8TD57 4116 aa16.92■□□□□ 0.3
HOMER3-206ENST00000594439 LINC01619G3V211 115 aa16.91■□□□□ 0.3
HOMER3-206ENST00000594439 CRYGCP07315 174 aa16.91■□□□□ 0.3
HOMER3-206ENST00000594439 C19orf35Q6ZS72 473 aa16.91■□□□□ 0.3
HOMER3-206ENST00000594439 USMG5Q96IX5 58 aa16.91■□□□□ 0.3
HOMER3-206ENST00000594439 GPR132Q9UNW8 380 aa16.91■□□□□ 0.3
HOMER3-206ENST00000594439 NSG2Q9Y328 171 aa16.91■□□□□ 0.3
HOMER3-206ENST00000594439 C3orf85A0A1B0GTC6 90 aa16.9■□□□□ 0.3
HOMER3-206ENST00000594439 TEX50A0A1B0GTY4 177 aa16.9■□□□□ 0.3
HOMER3-206ENST00000594439 HSPB1P04792 205 aaKnown RBP16.9■□□□□ 0.3
HOMER3-206ENST00000594439 SERPINE2P07093 398 aa16.9■□□□□ 0.3
HOMER3-206ENST00000594439 PSMB6P28072 239 aa16.9■□□□□ 0.3
HOMER3-206ENST00000594439 RHOGP84095 191 aa16.9■□□□□ 0.3
HOMER3-206ENST00000594439 SRRQ9GZT4 340 aa16.9■□□□□ 0.3
HOMER3-206ENST00000594439 C5orf66Q9H5L9 145 aa16.9■□□□□ 0.3
HOMER3-206ENST00000594439 AKIP1Q9NQ31 210 aa16.9■□□□□ 0.3
HOMER3-206ENST00000594439 SCP2D1Q9UJQ7 156 aa16.9■□□□□ 0.3
HOMER3-206ENST00000594439 C14orf166Q9Y224 244 aaKnown RBP16.9■□□□□ 0.3
HOMER3-206ENST00000594439 IGLC7A0M8Q6 106 aa16.89■□□□□ 0.29
HOMER3-206ENST00000594439 SNAPC5O75971 98 aa16.89■□□□□ 0.29
HOMER3-206ENST00000594439 CTRB1P17538 263 aa16.89■□□□□ 0.29
HOMER3-206ENST00000594439 SLURP1P55000 103 aa16.89■□□□□ 0.29
HOMER3-206ENST00000594439 KLK9Q2XQG4 91 aa16.89■□□□□ 0.29
HOMER3-206ENST00000594439 CTRB2Q6GPI1 263 aa16.89■□□□□ 0.29
HOMER3-206ENST00000594439 ZNF343Q6P1L6 599 aa16.89■□□□□ 0.29
HOMER3-206ENST00000594439 DCUN1D4Q92564 292 aa16.89■□□□□ 0.29
HOMER3-206ENST00000594439 SRSF8Q9BRL6 282 aaKnown RBP16.89■□□□□ 0.29
HOMER3-206ENST00000594439 QTRT1Q9BXR0 403 aaKnown RBP16.89■□□□□ 0.29
HOMER3-206ENST00000594439 GPR61Q9BZJ8 451 aa16.89■□□□□ 0.29
HOMER3-206ENST00000594439 MCUBQ9NWR8 336 aa16.89■□□□□ 0.29
HOMER3-206ENST00000594439 KLK9Q9UKQ9 250 aa16.89■□□□□ 0.29
HOMER3-206ENST00000594439 FAM223BA6NKX1 122 aa16.88■□□□□ 0.29
HOMER3-206ENST00000594439 REG1AP05451 166 aa16.88■□□□□ 0.29
HOMER3-206ENST00000594439 UCP1P25874 307 aa16.88■□□□□ 0.29
HOMER3-206ENST00000594439 AP3S2P59780 193 aa16.88■□□□□ 0.29
HOMER3-206ENST00000594439 SP6Q3SY56 376 aa16.88■□□□□ 0.29
HOMER3-206ENST00000594439 FAM223AQ8IWN6 122 aa16.88■□□□□ 0.29
HOMER3-206ENST00000594439 TOMM5Q8N4H5 51 aa16.88■□□□□ 0.29
HOMER3-206ENST00000594439 GDPD1Q8N9F7 314 aa16.88■□□□□ 0.29
HOMER3-206ENST00000594439 NECAP1Q8NC96 275 aa16.88■□□□□ 0.29
HOMER3-206ENST00000594439 OR1L8Q8NGR8 309 aa16.88■□□□□ 0.29
HOMER3-206ENST00000594439 FANCD2OSQ96PS1 177 aa16.88■□□□□ 0.29
HOMER3-206ENST00000594439 TSC22D3Q99576 134 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms