RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 DYNC2H1Q8NCM8 4307 aaKnown RBP10.02□□□□□ -0.8
APOC1-209ENST00000592885 IGLV11-55A0A075B6I3 123 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 ZNF785A8K8V0 405 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 CYB5BO43169 146 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 TNFSF12O43508 249 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 NDUFB8O95169 186 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 DEFA4P12838 97 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 AREGP15514 252 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 FAM106AQ4KMX7 169 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 HSD17B13Q7Z5P4 300 aaPredicted RBP10.02□□□□□ -0.81
APOC1-209ENST00000592885 IL17DQ8TAD2 202 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 RNF167Q9H6Y7 350 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 PLEKHA2Q9HB19 425 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 PLEKHA3Q9HB20 300 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 HRASLSQ9HDD0 168 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 THYN1Q9P016 225 aa10.02□□□□□ -0.81
APOC1-209ENST00000592885 CGB1A6NKQ9 187 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 XRCC3O43542 346 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 OR2C1O95371 312 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 OR2B8PP59922 312 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 HERV-K104P61576 105 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 NEDD8Q15843 81 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 UBE2NLQ5JXB2 153 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 CLEC19AQ6UXS0 136 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 ZNF818PQ6ZRF7 136 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 SLC16A13Q7RTY0 426 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 GPHA2Q96T91 129 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 COMMD5Q9GZQ3 224 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 IFT46Q9NQC8 304 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 ANAPC10Q9UM13 185 aa10.01□□□□□ -0.81
APOC1-209ENST00000592885 CSMD3Q7Z407 3707 aa10□□□□□ -0.81
APOC1-209ENST00000592885 IGLC7A0M8Q6 106 aa10□□□□□ -0.81
APOC1-209ENST00000592885 TMEM213A2RRL7 107 aa10□□□□□ -0.81
APOC1-209ENST00000592885 SULT1C2O00338 296 aa10□□□□□ -0.81
APOC1-209ENST00000592885 UPK2O00526 184 aa10□□□□□ -0.81
APOC1-209ENST00000592885 HLA-AP01891 365 aaKnown RBP10□□□□□ -0.81
APOC1-209ENST00000592885 CD7P09564 240 aa10□□□□□ -0.81
APOC1-209ENST00000592885 PTHLHP12272 177 aa10□□□□□ -0.81
APOC1-209ENST00000592885 CBLN1P23435 193 aa10□□□□□ -0.81
APOC1-209ENST00000592885 FXYD4P59646 89 aa10□□□□□ -0.81
APOC1-209ENST00000592885 GUCA2BQ16661 112 aa10□□□□□ -0.81
APOC1-209ENST00000592885 AADACL3Q5VUY0 350 aa10□□□□□ -0.81
APOC1-209ENST00000592885 ZNF57Q68EA5 555 aaPredicted RBP10□□□□□ -0.81
APOC1-209ENST00000592885 ZFAND6Q6FIF0 208 aa10□□□□□ -0.81
APOC1-209ENST00000592885 C19orf35Q6ZS72 473 aa10□□□□□ -0.81
APOC1-209ENST00000592885 TMEM17Q86X19 198 aa10□□□□□ -0.81
APOC1-209ENST00000592885 CADM3Q8N126 398 aa10□□□□□ -0.81
APOC1-209ENST00000592885 MARC2Q969Z3 335 aa10□□□□□ -0.81
APOC1-209ENST00000592885 S100A16Q96FQ6 103 aaKnown RBP10□□□□□ -0.81
APOC1-209ENST00000592885 QTRT1Q9BXR0 403 aaKnown RBP10□□□□□ -0.81
APOC1-209ENST00000592885 HIPK2Q9H2X6 1198 aa10□□□□□ -0.81
APOC1-209ENST00000592885 SRD5A3Q9H8P0 318 aa10□□□□□ -0.81
APOC1-209ENST00000592885 TMEM140Q9NV12 185 aa10□□□□□ -0.81
APOC1-209ENST00000592885 TRAV25A0A0B4J276 109 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 OR11H12B2RN74 326 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 IGHV3-23P01764 117 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 ELLP55199 621 aaPredicted RBP9.99□□□□□ -0.81
APOC1-209ENST00000592885 TAS2R46P59540 309 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 ERVK-16P61578 105 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 ANKRD55Q3KP44 614 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 DHRS11Q6UWP2 260 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 DMBX1Q8NFW5 382 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 OR51H1Q8NH63 302 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 ZNF502Q8TBZ5 544 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 VN1R17PQ8TDU5 208 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 MOB3AQ96BX8 217 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 WDR89Q96FK6 387 aaPredicted RBP9.99□□□□□ -0.81
APOC1-209ENST00000592885 ATP6V0BQ99437 205 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 EHFQ9NZC4 300 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 STARD9Q9P2P6 4700 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 LYSTQ99698 3801 aa9.99□□□□□ -0.81
APOC1-209ENST00000592885 RYR2Q92736 4967 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 ZNF320A2RRD8 509 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 MFSD2BA6NFX1 497 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 MARCH11A6NNE9 402 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 S1PR2O95136 353 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 REG1AP05451 166 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 C8orf88P0DMB2 117 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 MYOD1P15172 320 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 NAT1P18440 290 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 PTBP1P26599 531 aaKnown RBP eCLIP9.98□□□□□ -0.81
APOC1-209ENST00000592885 GNRHRP30968 328 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 TMEM69Q5SWH9 247 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 TMEM61Q8N0U2 210 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 DEFB125Q8N687 156 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 GDPD1Q8N9F7 314 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 VCX3AQ9NNX9 186 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 UFC1Q9Y3C8 167 aa9.98□□□□□ -0.81
APOC1-209ENST00000592885 TENM2Q9NT68 2774 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 RBMY1BA6NDE4 496 aaKnown RBP9.97□□□□□ -0.81
APOC1-209ENST00000592885 RBMY1EA6NEQ0 496 aaKnown RBP9.97□□□□□ -0.81
APOC1-209ENST00000592885 CLEC3BP05452 202 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 RBMY1DP0C7P1 496 aaKnown RBP9.97□□□□□ -0.81
APOC1-209ENST00000592885 EDN2P20800 178 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 F2RP25116 425 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 GPR183P32249 361 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 TAS2R20P59543 309 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 CMTM1Q8IZ96 169 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 UXS1Q8NBZ7 420 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 OR1L8Q8NGR8 309 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms