RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 GSKIPQ9P0R6 139 aa12.07□□□□□ -0.48
DDX39A-211ENST00000590239 ZNF257Q9Y2Q1 563 aa12.07□□□□□ -0.48
DDX39A-211ENST00000590239 RBMXL2O75526 392 aaKnown RBP12.06□□□□□ -0.48
DDX39A-211ENST00000590239 C5orf56Q8N8D9 126 aa12.06□□□□□ -0.48
DDX39A-211ENST00000590239 OR52E5Q8NH55 327 aa12.06□□□□□ -0.48
DDX39A-211ENST00000590239 FYTTD1Q96QD9 318 aaKnown RBP12.06□□□□□ -0.48
DDX39A-211ENST00000590239 RASL11BQ9BPW5 248 aa12.06□□□□□ -0.48
DDX39A-211ENST00000590239 CHIAQ9BZP6 476 aa12.06□□□□□ -0.48
DDX39A-211ENST00000590239 ZFP57Q9NU63 452 aa12.06□□□□□ -0.48
DDX39A-211ENST00000590239 NSG2Q9Y328 171 aa12.06□□□□□ -0.48
DDX39A-211ENST00000590239 CLDN34H7C241 214 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 ST8SIA3O43173 380 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 CHST1O43916 411 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 ACTL6BO94805 426 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 HLA-DRB1P01911 266 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 OR2B8PP59922 312 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 HSPE1P61604 102 aaKnown RBP12.05□□□□□ -0.48
DDX39A-211ENST00000590239 CD83Q01151 205 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 ID3Q02535 119 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 PJVKQ0ZLH3 352 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 PDLIM3Q53GG5 364 aaPredicted RBP12.05□□□□□ -0.48
DDX39A-211ENST00000590239 CXorf66Q5JRM2 361 aaPredicted RBP12.05□□□□□ -0.48
DDX39A-211ENST00000590239 AKAP14Q86UN6 197 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 OR5B3Q8NH48 314 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 QTRT1Q9BXR0 403 aaKnown RBP12.05□□□□□ -0.48
DDX39A-211ENST00000590239 COMMD5Q9GZQ3 224 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 HSPB7Q9UBY9 170 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 OR51B2Q9Y5P1 312 aa12.05□□□□□ -0.48
DDX39A-211ENST00000590239 DNAJC9-AS1A6NH13 148 aa12.04□□□□□ -0.48
DDX39A-211ENST00000590239 FCN1O00602 326 aa12.04□□□□□ -0.48
DDX39A-211ENST00000590239 CCNKO75909 580 aa12.04□□□□□ -0.48
DDX39A-211ENST00000590239 AMY1AP04745 511 aa12.04□□□□□ -0.48
DDX39A-211ENST00000590239 NKX2-1P43699 371 aaPredicted RBP12.04□□□□□ -0.48
DDX39A-211ENST00000590239 COMPP49747 757 aaPredicted RBP12.04□□□□□ -0.48
DDX39A-211ENST00000590239 SPCS3P61009 180 aa12.04□□□□□ -0.48
DDX39A-211ENST00000590239 TNFRSF9Q07011 255 aa12.04□□□□□ -0.48
DDX39A-211ENST00000590239 ZNF562Q6V9R5 426 aa12.04□□□□□ -0.48
DDX39A-211ENST00000590239 OR1L8Q8NGR8 309 aa12.04□□□□□ -0.48
DDX39A-211ENST00000590239 CLCC1Q96S66 551 aa12.04□□□□□ -0.48
DDX39A-211ENST00000590239 ANK3Q12955 4377 aaKnown RBP12.04□□□□□ -0.48
DDX39A-211ENST00000590239 TEX50A0A1B0GTY4 177 aa12.03□□□□□ -0.48
DDX39A-211ENST00000590239 MED6O75586 246 aa12.03□□□□□ -0.48
DDX39A-211ENST00000590239 CA2P00918 260 aa12.03□□□□□ -0.48
DDX39A-211ENST00000590239 IFNA17P01571 189 aa12.03□□□□□ -0.48
DDX39A-211ENST00000590239 MBPP02686 304 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-211ENST00000590239 PSMB6P28072 239 aa12.03□□□□□ -0.48
DDX39A-211ENST00000590239 TNXAQ16473 311 aa12.03□□□□□ -0.48
DDX39A-211ENST00000590239 PPP1R1CQ8WVI7 109 aa12.03□□□□□ -0.48
DDX39A-211ENST00000590239 WDR89Q96FK6 387 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-211ENST00000590239 ST6GAL2Q96JF0 529 aa12.03□□□□□ -0.48
DDX39A-211ENST00000590239 JMJD8Q96S16 334 aa12.03□□□□□ -0.48
DDX39A-211ENST00000590239 RANGRFQ9HD47 186 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-211ENST00000590239 TNFRSF19Q9NS68 423 aa12.03□□□□□ -0.48
DDX39A-211ENST00000590239 SVEP1Q4LDE5 3571 aa12.03□□□□□ -0.48
DDX39A-211ENST00000590239 GPR137BO60478 399 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 CNIH1O95406 144 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 RPL27AP46776 148 aaKnown RBP12.02□□□□□ -0.49
DDX39A-211ENST00000590239 HILS1P60008 231 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 GNB1P62873 340 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 CX3CL1P78423 397 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 SSBP2P81877 361 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-211ENST00000590239 PRCDQ00LT1 54 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 FGL1Q08830 312 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 FXYD3Q14802 87 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 TCTE3Q8IZS6 198 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 OR2T35Q8NGX2 323 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 NEURL2Q9BR09 285 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 SRSF8Q9BRL6 282 aaKnown RBP12.02□□□□□ -0.49
DDX39A-211ENST00000590239 NDUFA4L2Q9NRX3 87 aa12.02□□□□□ -0.49
DDX39A-211ENST00000590239 FN1P02751 2386 aaKnown RBP12.01□□□□□ -0.49
DDX39A-211ENST00000590239 TNCP24821 2201 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 IGHV7-81A0A0B4J1V7 117 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 K7EPK0 472 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 WRBO00258 174 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 SYNGR2O43760 224 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 NXPH3O95157 252 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 LY86O95711 162 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 SCGB1D2O95969 90 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 PET100P0DJ07 73 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 MYOD1P15172 320 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 RPL15P61313 204 aaKnown RBP12.01□□□□□ -0.49
DDX39A-211ENST00000590239 RAB32Q13637 225 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 ARPC1AQ92747 370 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 NPFFR1Q9GZQ6 430 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 RBKSQ9H477 322 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 ESM1Q9NQ30 184 aa12.01□□□□□ -0.49
DDX39A-211ENST00000590239 CEBPZOSA8MTT3 80 aa12□□□□□ -0.49
DDX39A-211ENST00000590239 INS-IGF2F8WCM5 200 aa12□□□□□ -0.49
DDX39A-211ENST00000590239 PFDN1O60925 122 aa12□□□□□ -0.49
DDX39A-211ENST00000590239 MPC2O95563 127 aa12□□□□□ -0.49
DDX39A-211ENST00000590239 OPN1MWP04001 364 aa12□□□□□ -0.49
DDX39A-211ENST00000590239 RLN2P04090 185 aa12□□□□□ -0.49
DDX39A-211ENST00000590239 RNASE1P07998 156 aaKnown RBP12□□□□□ -0.49
DDX39A-211ENST00000590239 OPN1MW2P0DN77 364 aa12□□□□□ -0.49
DDX39A-211ENST00000590239 OPN1MW3P0DN78 364 aa12□□□□□ -0.49
DDX39A-211ENST00000590239 S100A10P60903 97 aa12□□□□□ -0.49
DDX39A-211ENST00000590239 POLR2GP62487 172 aaKnown RBP eCLIP12□□□□□ -0.49
DDX39A-211ENST00000590239 C10orf55Q5SWW7 151 aa12□□□□□ -0.49
DDX39A-211ENST00000590239 HSD17B13Q7Z5P4 300 aaPredicted RBP12□□□□□ -0.49
DDX39A-211ENST00000590239 MRPL41Q8IXM3 137 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms