RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 NECAP1Q8NC96 275 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 EDARADDQ8WWZ3 215 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 SLC25A38Q96DW6 304 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 SDHAF2Q9NX18 166 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 RSL24D1Q9UHA3 163 aaKnown RBP9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 APLNQ9ULZ1 77 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 KCNK7Q9Y2U2 307 aa9.41□□□□□ -0.9
PRKCSH-210ENST00000589990 SMIM31A0A1B0GVY4 71 aa9.4□□□□□ -0.9
PRKCSH-210ENST00000589990 MFNGO00587 321 aa9.4□□□□□ -0.9
PRKCSH-210ENST00000589990 DEFB4AO15263 64 aa9.4□□□□□ -0.9
PRKCSH-210ENST00000589990 HPGDSO60760 199 aa9.4□□□□□ -0.9
PRKCSH-210ENST00000589990 ODF3L2Q3SX64 289 aa9.4□□□□□ -0.9
PRKCSH-210ENST00000589990 OR1L6Q8NGR2 347 aa9.4□□□□□ -0.9
PRKCSH-210ENST00000589990 DYNC2LI1Q8TCX1 351 aa9.4□□□□□ -0.9
PRKCSH-210ENST00000589990 ZNF430Q9H8G1 570 aaPredicted RBP9.4□□□□□ -0.9
PRKCSH-210ENST00000589990 RDH8Q9NYR8 311 aa9.4□□□□□ -0.9
PRKCSH-210ENST00000589990 NDUFA13Q9P0J0 144 aa9.4□□□□□ -0.9
PRKCSH-210ENST00000589990 HERC1Q15751 4861 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 A0A0A6YYH2 397 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 DPPA5A6NC42 116 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 TMEM235A6NFC5 223 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 A6NJ64 397 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 A8MWP6 167 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 FAM25AB3EWG3 89 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 FAM25CB3EWG5 89 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 FAM25GB3EWG6 89 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 RGS5O15539 181 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 APOA1P02647 267 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 ARL3P36405 182 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 GNG2P59768 71 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 RBMS2Q15434 407 aaKnown RBP9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 ZNF124Q15973 351 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 HACD4Q5VWC8 232 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 TTC9CQ8N5M4 171 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 TMEM217Q8N7C4 229 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 STPG3Q8N7X2 389 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 CMTM3Q96MX0 182 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 DCUN1D5Q9BTE7 237 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 RBM38Q9H0Z9 239 aaKnown RBP9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 OR2D2Q9H210 308 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 C12orf4Q9NQ89 552 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 FBXL7Q9UJT9 491 aa9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 ELF5Q9UKW6 265 aaPredicted RBP9.39□□□□□ -0.91
PRKCSH-210ENST00000589990 TRBV6-6A0A0A6YYG2 114 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 IGHV3-35A0A0C4DH35 117 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 A0A1B0GW64 132 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 E7EUB6 86 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 UBE2CO00762 179 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 RTL8CO15255 209 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 EIF4EP06730 217 aaKnown RBP9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 ELK1P19419 428 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 UBE2KP61086 200 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 ANKRD55Q3KP44 614 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 ZNF585BQ52M93 769 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 TMEM69Q5SWH9 247 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 LINC00336Q6ZUF6 198 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 MOB1BQ7L9L4 216 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 OR2C3Q8N628 320 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 TEX45Q8NA69 505 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 OR5B3Q8NH48 314 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 C11orf45Q8TAV5 145 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 C2CD4CQ8TF44 421 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 DGCR14Q96DF8 476 aaKnown RBP9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 FANCD2OSQ96PS1 177 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 Q9N2K0 584 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 CCDC59Q9P031 241 aaKnown RBP9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 MGAT4AQ9UM21 535 aa9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 MRPS7Q9Y2R9 242 aaKnown RBP9.38□□□□□ -0.91
PRKCSH-210ENST00000589990 KIR2DL5BA0A0G2JN68 375 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 KIR2DL5BA0A0G2JPC4 375 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 PRSS29PA6NIE9 313 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 LINC00473A8K010 186 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 IGLL5B9A064 214 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 TEX22C9J3V5 150 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 ZNF701M0R085 212 aaPredicted RBP9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 CTDSP2O14595 271 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 CRYZL1O95825 349 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 C8orf88P0DMB2 117 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 PTHLHP12272 177 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 RBPMS2Q6ZRY4 209 aaKnown RBP9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 ZNF575Q86XF7 245 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 KIR2DL5AQ8N109 375 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 GVQW1Q8N7I0 195 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 KIR2DL5BQ8NHK3 375 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 MCFD2Q8NI22 146 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 NUDCD2Q8WVJ2 157 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 MAFIPQ8WZ33 124 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 C6orf62Q9GZU0 229 aaPredicted RBP9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 AUNIPQ9H7T9 357 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 MAP6D1Q9H9H5 199 aa9.37□□□□□ -0.91
PRKCSH-210ENST00000589990 MFSD2BA6NFX1 497 aa9.36□□□□□ -0.91
PRKCSH-210ENST00000589990 TRDCB7Z8K6 153 aa9.36□□□□□ -0.91
PRKCSH-210ENST00000589990 IFNA4P05014 189 aa9.36□□□□□ -0.91
PRKCSH-210ENST00000589990 FCGR3AP08637 254 aa9.36□□□□□ -0.91
PRKCSH-210ENST00000589990 IL6RP08887 468 aaPredicted RBP9.36□□□□□ -0.91
PRKCSH-210ENST00000589990 SAA1P0DJI8 122 aaPredicted RBP9.36□□□□□ -0.91
PRKCSH-210ENST00000589990 AREGP15514 252 aa9.36□□□□□ -0.91
PRKCSH-210ENST00000589990 TAS2R20P59543 309 aa9.36□□□□□ -0.91
PRKCSH-210ENST00000589990 VMA21Q3ZAQ7 101 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms