RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SLC31A2O15432 143 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 IGHG3P01860 377 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 RND2P52198 227 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 PCSK4Q6UW60 755 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 Q6ZS92 163 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 OR51G1Q8NGK1 321 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 IL22RA2Q969J5 263 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 HIVEP3Q5T1R4 2406 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 TMEM50AO95807 157 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 CDKN1AP38936 164 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 GPR6P46095 362 aaPredicted RBP12.14□□□□□ -0.47
RETREG3-208ENST00000589797 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 NAT8Q9UHE5 227 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 SLC45A2Q9UMX9 530 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 FUT9Q9Y231 359 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 TRAPPC1Q9Y5R8 145 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 KBTBD11O94819 623 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 OR9G9P0C7N8 305 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 CFPP27918 469 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 C10orf55Q5SWW7 151 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 LILRB1Q8NHL6 650 aaPredicted RBP12.14□□□□□ -0.47
RETREG3-208ENST00000589797 NPIPB3Q92617 1050 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 HIF1ANQ9NWT6 349 aa12.14□□□□□ -0.47
RETREG3-208ENST00000589797 CEACAM18A8MTB9 384 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 ARL14EPLP0DKL9 152 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 MRPL54Q6P161 138 aaKnown RBP12.13□□□□□ -0.47
RETREG3-208ENST00000589797 LYPD6Q86Y78 171 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 ZNF525Q8N782 197 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 GATAD1Q8WUU5 269 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 MRPL20Q9BYC9 149 aaKnown RBP12.13□□□□□ -0.47
RETREG3-208ENST00000589797 IGKV1D-17A0A075B6S4 117 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 SRRM5B3KS81 715 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 IGKV3-15P01624 115 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 LINC00869P0C866 280 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 C1orf174Q8IYL3 243 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 ZNF439Q8NDP4 499 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 OR1L4Q8NGR5 311 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 TOLLIPQ9H0E2 274 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 SEBOXQ9HB31 216 aaPredicted RBP12.13□□□□□ -0.47
RETREG3-208ENST00000589797 DNASE2O00115 360 aaPredicted RBP12.13□□□□□ -0.47
RETREG3-208ENST00000589797 CNN1P51911 297 aaKnown RBP12.13□□□□□ -0.47
RETREG3-208ENST00000589797 OR2T10Q8NGZ9 312 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 PRO1933Q9H354 126 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 METTL1Q9UBP6 276 aaKnown RBP12.13□□□□□ -0.47
RETREG3-208ENST00000589797 NAT8BQ9UHF3 227 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 LRRK2Q5S007 2527 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 DYSFO75923 2080 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 TNFSF13O75888 250 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 CLEC3BP05452 202 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 ASCL4Q6XD76 172 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 AUP1Q9Y679 476 aa12.13□□□□□ -0.47
RETREG3-208ENST00000589797 C9JQL5 133 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 CDK2AP1O14519 115 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 TBR1Q16650 682 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 NMSQ5H8A3 153 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 C16orf82Q7Z2V1 217 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 SGMS2Q8NHU3 365 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 FAM222BQ8WU58 562 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 DPRXA6NFQ7 191 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 MOSP00540 346 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
RETREG3-208ENST00000589797 ECSCRQ19T08 205 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 BORCS7Q96B45 105 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 TIMM9Q9Y5J7 89 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 IGLV3-1P01715 115 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 DUTP33316 252 aaKnown RBP12.12□□□□□ -0.47
RETREG3-208ENST00000589797 KIR3DL3Q8N743 410 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 OR10W1Q8NGF6 305 aa12.12□□□□□ -0.47
RETREG3-208ENST00000589797 XKRY2A2RUG3 117 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 PGPEP1LA6NFU8 196 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 FCN1O00602 326 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 IGFBP2P18065 325 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 APOBEC3AP31941 199 aaPredicted RBP12.11□□□□□ -0.47
RETREG3-208ENST00000589797 NPCDR1Q9BY65 106 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 SPRY4Q9C004 299 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 TECRQ9NZ01 308 aaKnown RBP12.11□□□□□ -0.47
RETREG3-208ENST00000589797 C10orf142B7Z368 130 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 ARL16Q0P5N6 197 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 FBXL15Q9H469 300 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 COA4Q9NYJ1 87 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 IGHV3OR16-13A0A075B7E8 117 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 IGHV3-74A0A0B4J1X5 117 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 HELTA6NFD8 242 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 ZNF729A6NN14 1252 aaPredicted RBP12.11□□□□□ -0.47
RETREG3-208ENST00000589797 FGF16O43320 207 aa12.11□□□□□ -0.47
RETREG3-208ENST00000589797 GNG7O60262 68 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 UCNP55089 124 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 LRRC75BQ2VPJ9 315 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 OR10G8Q8NGN5 311 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 RNASE6Q93091 150 aaKnown RBP12.1□□□□□ -0.47
RETREG3-208ENST00000589797 PARLQ9H300 379 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 SERTM2A0A1B0GWG4 89 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 TSTD3H0UI37 97 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 LRTM2Q8N967 370 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 HIST1H2BAQ96A08 127 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 POM121Q96HA1 1249 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 J3KRW8 73 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 AP4M1O00189 453 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 FXYD3Q14802 87 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms