RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 ZNF257Q9Y2Q1 563 aa12.72□□□□□ -0.37
DNMT1-221ENST00000589538 FAM223BA6NKX1 122 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 MARCH11A6NNE9 402 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 NPIPB5A8MRT5 1133 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 IL6RP08887 468 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-221ENST00000589538 AKAIN1P0CW23 69 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 APELAP0DMC3 54 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 PTBP1P26599 531 aaKnown RBP eCLIP12.71□□□□□ -0.37
DNMT1-221ENST00000589538 ZNF585BQ52M93 769 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 FAM209BQ5JX69 171 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 C10orf55Q5SWW7 151 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 C9orf66Q5T8R8 295 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 THOC7Q6I9Y2 204 aaKnown RBP12.71□□□□□ -0.37
DNMT1-221ENST00000589538 FAM223AQ8IWN6 122 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 CCDC71LQ8N9Z2 235 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 FYTTD1Q96QD9 318 aaKnown RBP12.71□□□□□ -0.37
DNMT1-221ENST00000589538 COMMD5Q9GZQ3 224 aa12.71□□□□□ -0.37
DNMT1-221ENST00000589538 TEX22C9J3V5 150 aa12.7□□□□□ -0.38
DNMT1-221ENST00000589538 WIPF1O43516 503 aa12.7□□□□□ -0.38
DNMT1-221ENST00000589538 IGHV3-11P01762 117 aa12.7□□□□□ -0.38
DNMT1-221ENST00000589538 SERPINE2P07093 398 aa12.7□□□□□ -0.38
DNMT1-221ENST00000589538 RPA2P15927 270 aa12.7□□□□□ -0.38
DNMT1-221ENST00000589538 ZP3P21754 424 aa12.7□□□□□ -0.38
DNMT1-221ENST00000589538 SCGB2B2Q4G0G5 96 aa12.7□□□□□ -0.38
DNMT1-221ENST00000589538 OR4D10Q8NGI6 311 aa12.7□□□□□ -0.38
DNMT1-221ENST00000589538 TSC22D3Q99576 134 aa12.7□□□□□ -0.38
DNMT1-221ENST00000589538 RANGRFQ9HD47 186 aaPredicted RBP12.7□□□□□ -0.38
DNMT1-221ENST00000589538 ANKRD20A5PA0PJZ0 165 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 HMX3A6NHT5 357 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 B3GALNT1O75752 331 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 SNAPC5O75971 98 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 KRASP01116 189 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 INSL3P51460 131 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 PPP5CP53041 499 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 PIGPP57054 158 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 EGFEM1PQ0D2K5 195 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 SURF2Q15527 256 aaPredicted RBP12.69□□□□□ -0.38
DNMT1-221ENST00000589538 HSD17B13Q7Z5P4 300 aaPredicted RBP12.69□□□□□ -0.38
DNMT1-221ENST00000589538 NECAP1Q8NC96 275 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 PRRT1Q99946 306 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 ALX4Q9H161 411 aaPredicted RBP12.69□□□□□ -0.38
DNMT1-221ENST00000589538 FKBP11Q9NYL4 201 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 COPZ2Q9P299 210 aa12.69□□□□□ -0.38
DNMT1-221ENST00000589538 IGHV4OR15-8A0A075B7B6 117 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 A0A087WW49 117 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 TRBV9A0A0B4J1U6 114 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 SEC14L6B5MCN3 397 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 H0Y980 276 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 OVOL1O14753 267 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 CYB5BO43169 146 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 ATG12O94817 140 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 CRYGCP07315 174 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 HIST1H1BP16401 226 aaKnown RBP12.68□□□□□ -0.38
DNMT1-221ENST00000589538 G6PCP35575 357 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 AP3S2P59780 193 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 OR2B8PP59922 312 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 RHOGP84095 191 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 ZNF343Q6P1L6 599 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 OR4C16Q8NGL9 310 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 OR1L8Q8NGR8 309 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 DCUN1D4Q92564 292 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 QTRT1Q9BXR0 403 aaKnown RBP12.68□□□□□ -0.38
DNMT1-221ENST00000589538 SCP2D1Q9UJQ7 156 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 PRNDQ9UKY0 176 aa12.68□□□□□ -0.38
DNMT1-221ENST00000589538 C14orf166Q9Y224 244 aaKnown RBP12.68□□□□□ -0.38
DNMT1-221ENST00000589538 CTSDP07339 412 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-221ENST00000589538 CTRB1P17538 263 aa12.67□□□□□ -0.38
DNMT1-221ENST00000589538 PSMB6P28072 239 aa12.67□□□□□ -0.38
DNMT1-221ENST00000589538 FAUP35544 74 aaKnown RBP12.67□□□□□ -0.38
DNMT1-221ENST00000589538 ATP5G2Q06055 141 aa12.67□□□□□ -0.38
DNMT1-221ENST00000589538 PYDC2Q56P42 97 aa12.67□□□□□ -0.38
DNMT1-221ENST00000589538 SPANXN2Q5MJ10 180 aa12.67□□□□□ -0.38
DNMT1-221ENST00000589538 CTRB2Q6GPI1 263 aa12.67□□□□□ -0.38
DNMT1-221ENST00000589538 OR13C8Q8NGS7 320 aa12.67□□□□□ -0.38
DNMT1-221ENST00000589538 MARCH1Q8TCQ1 289 aa12.67□□□□□ -0.38
DNMT1-221ENST00000589538 SCGB3A2Q96PL1 93 aa12.67□□□□□ -0.38
DNMT1-221ENST00000589538 THAP7Q9BT49 309 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-221ENST00000589538 SLC2A8Q9NY64 477 aa12.67□□□□□ -0.38
DNMT1-221ENST00000589538 PEF1Q9UBV8 284 aaKnown RBP12.67□□□□□ -0.38
DNMT1-221ENST00000589538 TRAV3A0A0B4J244 114 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 C3orf85A0A1B0GTC6 90 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 A0A1B0GW64 132 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 E7EUB6 86 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 TRAPPC2P0DI81 140 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 TRAPPC2BP0DI82 140 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 DEFA4P12838 97 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 AREGP15514 252 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 PI3P19957 117 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 SLURP1P55000 103 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 KLK9Q2XQG4 91 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 H2BFWTQ7Z2G1 175 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 ZNF429Q86V71 674 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 OR5B3Q8NH48 314 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 DEDD2Q8WXF8 326 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 DLX4Q92988 240 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-221ENST00000589538 AKIP1Q9NQ31 210 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 AURKAIP1Q9NWT8 199 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-221ENST00000589538 KLK9Q9UKQ9 250 aa12.66□□□□□ -0.38
DNMT1-221ENST00000589538 HOXD3P31249 432 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-221ENST00000589538 ZNF45Q02386 682 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms