RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 MAGEA2P43356 314 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 CDC34P49427 236 aaPredicted RBP0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 TBPL1P62380 186 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 TPM4P67936 248 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 PLCXD2Q0VAA5 305 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 MLLT11Q13015 90 aaPredicted RBP0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 C1orf194Q5T5A4 169 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 CST9Q5W186 159 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 SBSNQ6UWP8 590 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 NAA40Q86UY6 237 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 OR51T1Q8NGJ9 327 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 OR13C8Q8NGS7 320 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 ANKRD36BP1Q96IX9 119 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 CCL13Q99616 98 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 TMEM109Q9BVC6 243 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 MAP1LC3AQ9H492 121 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 DKKL1Q9UK85 242 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 POLR1DQ9Y2S0 133 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 POLR3HQ9Y535 204 aaPredicted RBP0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 TIMM9Q9Y5J7 89 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 UTP20O75691 2785 aaKnown RBP0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 MYO15AQ9UKN7 3530 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 SPEGQ15772 3267 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 COL12A1Q99715 3063 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 ADGBQ8N7X0 1667 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 CFAP43Q8NDM7 1665 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 KIAA0556O60303 1618 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 LRP6O75581 1613 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 ADCY10Q96PN6 1610 aa0.75□□□□□ -2.29
HMGN1P30-201ENST00000589286 SYNJ1O43426 1573 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 MAPKBP1O60336 1514 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 ANKRD11Q6UB99 2663 aaPredicted RBP0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 GCN1Q92616 2671 aaKnown RBP0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 PRG4Q92954 1404 aaPredicted RBP0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 TRIOO75962 3097 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 MAP3K5Q99683 1374 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 KIF15Q9NS87 1388 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 DMXL1Q9Y485 3027 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 ZZEF1O43149 2961 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 CRYBG3Q68DQ2 2970 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 A0A1B0GW54 56 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 HMSDA8MTL9 139 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 PFDN6O15212 129 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 SLC16A4O15374 487 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 DEXIO95424 95 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 REG1AP05451 166 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 HLA-DQB2P05538 268 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 OCM2P0CE71 109 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 PSMB8P28062 276 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 FXYD7P58549 80 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 AP1S1P61966 158 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 TNFAIP6P98066 277 aaPredicted RBP0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 PRB3Q04118 309 aaPredicted RBP0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 PPP1R1AQ13522 171 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 COTL1Q14019 142 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 FAM78BQ5VT40 261 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 LRRN1Q6UXK5 716 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 ZNF705AQ6ZN79 300 aaPredicted RBP0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 FP248Q71RG6 208 aaPredicted RBP0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 UBL4BQ8N7F7 174 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 C12orf43Q96C57 262 aaKnown RBP0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 NKIRAS1Q9NYS0 192 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 USE1Q9NZ43 259 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 NOSIPQ9Y314 301 aaKnown RBP0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 TENM4Q6N022 2769 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 BCORL1Q5H9F3 1711 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 TENM3Q9P273 2699 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 TECTAO75443 2155 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 CUL7Q14999 1698 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 CAMSAP1Q5T5Y3 1602 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 ALKQ9UM73 1620 aa0.74□□□□□ -2.29
HMGN1P30-201ENST00000589286 IFT140Q96RY7 1462 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 POLEQ07864 2286 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 KALRNO60229 2985 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 FREM2Q5SZK8 3169 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 PREX1Q8TCU6 1659 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 THSD7AQ9UPZ6 1657 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 C21orf140B9A014 251 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 DISC1C4P0D8 188 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 H0Y980 276 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 M0QZ92 97 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 CREBL2O60519 120 aaPredicted RBP0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 APOEP02649 317 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 RPSAP08865 295 aaKnown RBP0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 CCL1P22362 96 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 RPL12P30050 165 aaKnown RBP0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 BLVRAP53004 296 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 TAS2R20P59543 309 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 CDK5R1Q15078 307 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 MIAQ16674 131 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 LRRC75BQ2VPJ9 315 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 CDKL4Q5MAI5 379 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 SAPCD1Q5SSQ6 148 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 ZNF550Q7Z398 422 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 UMODL1-AS1Q8N2C9 162 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 PACRGLQ8N7B6 248 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 GPR32P1Q8NGA4 272 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 OR1L8Q8NGR8 309 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 SGMS2Q8NHU3 365 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 PIGXQ8TBF5 258 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms