RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 OR11H4Q8NGC9 324 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 LYRM2Q9NU23 88 aaPredicted RBP10.17□□□□□ -0.78
VMP1-202ENST00000585847 TMEM140Q9NV12 185 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 CUBNO60494 3623 aa10.17□□□□□ -0.78
VMP1-202ENST00000585847 MDFIC2A0A1B0GVS7 189 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 INS-IGF2F8WCM5 200 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 RBMXL2O75526 392 aaKnown RBP10.16□□□□□ -0.78
VMP1-202ENST00000585847 SCGB1D2O95969 90 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 PAX6P26367 422 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 SAA4P35542 130 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 G6PCP35575 357 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 SRP14P37108 136 aaKnown RBP10.16□□□□□ -0.78
VMP1-202ENST00000585847 AP2S1P53680 142 aaPredicted RBP10.16□□□□□ -0.78
VMP1-202ENST00000585847 OR2B11Q5JQS5 317 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 THNSL2Q86YJ6 484 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 STPG2Q8N412 459 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 GRPEL2Q8TAA5 225 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 TMEM167AQ8TBQ9 72 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 C22orf15Q8WYQ4 148 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 SMIM8Q96KF7 97 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 GPHA2Q96T91 129 aa10.16□□□□□ -0.78
VMP1-202ENST00000585847 SRSF8Q9BRL6 282 aaKnown RBP10.16□□□□□ -0.78
VMP1-202ENST00000585847 RCL1Q9Y2P8 373 aaKnown RBP10.16□□□□□ -0.78
VMP1-202ENST00000585847 A0A0U1RQK1 487 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 A0A1W2PPI3 338 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 SMLR1H3BR10 107 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 BCL2L11O43521 198 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 KBTBD11O94819 623 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 IL6RP08887 468 aaPredicted RBP10.15□□□□□ -0.78
VMP1-202ENST00000585847 SRD5A1P18405 259 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 HNF1AP20823 631 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 DEFB112Q30KQ8 113 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 OR4A47Q6IF82 309 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 EIF5AL1Q6IS14 154 aaKnown RBP10.15□□□□□ -0.78
VMP1-202ENST00000585847 ZNF767PQ75MW2 155 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 OR2C3Q8N628 320 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 PHYHIPLQ96FC7 376 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 RNF126Q9BV68 326 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 ARL6Q9H0F7 186 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 PRDM13Q9H4Q3 707 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 TMEM14BQ9NUH8 114 aa10.15□□□□□ -0.78
VMP1-202ENST00000585847 LSM5Q9Y4Y9 91 aaKnown RBP10.15□□□□□ -0.78
VMP1-202ENST00000585847 A0A1W2PN81 502 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 RNF222A6NCQ9 220 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 H0YIZ8 118 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 RGS13O14921 159 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 JTBO76095 146 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 IGKV1-16P04430 117 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 FAM106CPP0CH98 169 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 RPL12P30050 165 aaKnown RBP10.14□□□□□ -0.79
VMP1-202ENST00000585847 CHRNA7P36544 502 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 HSPE1P61604 102 aaKnown RBP10.14□□□□□ -0.79
VMP1-202ENST00000585847 UBA52P62987 128 aaKnown RBP10.14□□□□□ -0.79
VMP1-202ENST00000585847 HBG1P69891 147 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 HBG2P69892 147 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 RELBQ01201 579 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 EBI3Q14213 229 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 DIAPH2-AS1Q14236 149 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 ZNF266Q14584 549 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 Q5BKY6 102 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 LAMTOR1Q6IAA8 161 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 MOB3BQ86TA1 216 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 MMD2Q8IY49 270 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 OR2T10Q8NGZ9 312 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 ARPC5LQ9BPX5 153 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 HIPK2Q9H2X6 1198 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 ZC4H2Q9NQZ6 224 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 C1RLQ9NZP8 487 aa10.14□□□□□ -0.79
VMP1-202ENST00000585847 A0A0G2JRQ6 117 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 UPK2O00526 184 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 SSSCA1O60232 199 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 DFFBO76075 338 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 VENTXO95231 258 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 MOSP00540 346 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 IFNA7P01567 189 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 COMPP49747 757 aaPredicted RBP10.13□□□□□ -0.79
VMP1-202ENST00000585847 NKX2-5P52952 324 aaPredicted RBP10.13□□□□□ -0.79
VMP1-202ENST00000585847 RPS16P62249 146 aaKnown RBP10.13□□□□□ -0.79
VMP1-202ENST00000585847 POLR2GP62487 172 aaKnown RBP eCLIP10.13□□□□□ -0.79
VMP1-202ENST00000585847 RPL8P62917 257 aaKnown RBP10.13□□□□□ -0.79
VMP1-202ENST00000585847 OPCMLQ14982 345 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 LGALSLQ3ZCW2 172 aaPredicted RBP10.13□□□□□ -0.79
VMP1-202ENST00000585847 TMUB2Q71RG4 321 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 STOML3Q8TAV4 291 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 DTD1Q8TEA8 209 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 COMMD5Q9GZQ3 224 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 MEGF9Q9H1U4 602 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 C11orf1Q9H5F2 150 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 ENY2Q9NPA8 101 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 OR5AC2Q9NZP5 309 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 KIAA1456Q9P272 454 aa10.13□□□□□ -0.79
VMP1-202ENST00000585847 BORCS7-ASMTA0A0B4J1R7 106 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 TIMM23O14925 209 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 CHST1O43916 411 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 SOX15O60248 233 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 IFNA17P01571 189 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 SAA1P0DJI8 122 aaPredicted RBP10.12□□□□□ -0.79
VMP1-202ENST00000585847 TPT1P13693 172 aaKnown RBP10.12□□□□□ -0.79
VMP1-202ENST00000585847 CXCL2P19875 107 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 REG1BP48304 166 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms