RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 TMED4Q7Z7H5 227 aa16.74■□□□□ 0.27
RETREG3-202ENST00000585726 OR4F17Q8NGA8 305 aa16.74■□□□□ 0.27
RETREG3-202ENST00000585726 OR4F4Q96R69 305 aa16.74■□□□□ 0.27
RETREG3-202ENST00000585726 SPIN2AQ99865 258 aa16.74■□□□□ 0.27
RETREG3-202ENST00000585726 SPIN2BQ9BPZ2 258 aa16.74■□□□□ 0.27
RETREG3-202ENST00000585726 CRYM-AS1A6NIL9 109 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 E7EUB6 86 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 IL6RP08887 468 aaPredicted RBP16.73■□□□□ 0.27
RETREG3-202ENST00000585726 OR9G9P0C7N8 305 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 C8orf86Q6ZUL3 223 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 H2BFWTQ7Z2G1 175 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 ZNF695Q8IW36 515 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 SGPP2Q8IWX5 399 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 RNF152Q8N8N0 203 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 TMEM230Q96A57 120 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 SEC22AQ96IW7 307 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 TMEM68Q96MH6 324 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 COMMD5Q9GZQ3 224 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 COA4Q9NYJ1 87 aa16.73■□□□□ 0.27
RETREG3-202ENST00000585726 NAP1L6A6NFF2 107 aa16.72■□□□□ 0.27
RETREG3-202ENST00000585726 CENPXA8MT69 81 aa16.72■□□□□ 0.27
RETREG3-202ENST00000585726 SNAPC5O75971 98 aa16.72■□□□□ 0.27
RETREG3-202ENST00000585726 TPPP2P59282 170 aa16.72■□□□□ 0.27
RETREG3-202ENST00000585726 OR2B8PP59922 312 aa16.72■□□□□ 0.27
RETREG3-202ENST00000585726 OR5B12Q96R08 314 aa16.72■□□□□ 0.27
RETREG3-202ENST00000585726 TRGV3P03979 118 aa16.71■□□□□ 0.27
RETREG3-202ENST00000585726 UCP1P25874 307 aa16.71■□□□□ 0.27
RETREG3-202ENST00000585726 AKR1C2P52895 323 aa16.71■□□□□ 0.27
RETREG3-202ENST00000585726 ZNF491Q8N8L2 437 aa16.71■□□□□ 0.27
RETREG3-202ENST00000585726 RNASE11Q8TAA1 199 aaKnown RBP16.71■□□□□ 0.27
RETREG3-202ENST00000585726 DUX3Q96PT4 197 aa16.71■□□□□ 0.27
RETREG3-202ENST00000585726 SLC25A21Q9BQT8 299 aaPredicted RBP16.71■□□□□ 0.27
RETREG3-202ENST00000585726 TMEM222Q9H0R3 208 aa16.71■□□□□ 0.27
RETREG3-202ENST00000585726 PRR13Q9NZ81 148 aa16.71■□□□□ 0.27
RETREG3-202ENST00000585726 A0A1B0GW64 132 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 TEX22C9J3V5 150 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 B3GALNT1O75752 331 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 PF4P02776 101 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 CDX1P47902 265 aaPredicted RBP16.7■□□□□ 0.26
RETREG3-202ENST00000585726 KIAA0141Q14154 515 aaPredicted RBP16.7■□□□□ 0.26
RETREG3-202ENST00000585726 ZNF846Q147U1 533 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 IZUMO4Q1ZYL8 232 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 OR4A16Q8NH70 328 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 CCDC32Q9BV29 185 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 HINT2Q9BX68 163 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 GNB4Q9HAV0 340 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 KCNIP3Q9Y2W7 256 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 OR51B2Q9Y5P1 312 aa16.7■□□□□ 0.26
RETREG3-202ENST00000585726 TEX50A0A1B0GTY4 177 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 CGB1A6NKQ9 187 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 RBMXL2O75526 392 aaKnown RBP16.69■□□□□ 0.26
RETREG3-202ENST00000585726 ATG12O94817 140 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 IGKV1-5P01602 117 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 PRH1P02810 166 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 REG1AP05451 166 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 DEFA5Q01523 94 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 DHODHQ02127 395 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 RBMS2Q15434 407 aaKnown RBP16.69■□□□□ 0.26
RETREG3-202ENST00000585726 DEFB136Q30KP8 78 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 MYOZ3Q8TDC0 251 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 GLYATL2Q8WU03 294 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 UBE2E2Q96LR5 201 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 TSC22D3Q99576 134 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 WDR12Q9GZL7 423 aaKnown RBP16.69■□□□□ 0.26
RETREG3-202ENST00000585726 PRNDQ9UKY0 176 aa16.69■□□□□ 0.26
RETREG3-202ENST00000585726 PLA2G10O15496 165 aa16.68■□□□□ 0.26
RETREG3-202ENST00000585726 IGHV3-11P01762 117 aa16.68■□□□□ 0.26
RETREG3-202ENST00000585726 AREGP15514 252 aa16.68■□□□□ 0.26
RETREG3-202ENST00000585726 C19orf35Q6ZS72 473 aa16.68■□□□□ 0.26
RETREG3-202ENST00000585726 TTC9CQ8N5M4 171 aa16.68■□□□□ 0.26
RETREG3-202ENST00000585726 OR1L8Q8NGR8 309 aa16.68■□□□□ 0.26
RETREG3-202ENST00000585726 LHFPL5Q8TAF8 219 aa16.68■□□□□ 0.26
RETREG3-202ENST00000585726 C7orf50Q9BRJ6 194 aaKnown RBP16.68■□□□□ 0.26
RETREG3-202ENST00000585726 SLA2Q9H6Q3 261 aa16.68■□□□□ 0.26
RETREG3-202ENST00000585726 DBX1A6NMT0 343 aa16.67■□□□□ 0.26
RETREG3-202ENST00000585726 CDS2O95674 445 aa16.67■□□□□ 0.26
RETREG3-202ENST00000585726 BTCP35070 178 aa16.67■□□□□ 0.26
RETREG3-202ENST00000585726 TMEM268Q5VZI3 342 aa16.67■□□□□ 0.26
RETREG3-202ENST00000585726 SLC25A42Q86VD7 318 aa16.67■□□□□ 0.26
RETREG3-202ENST00000585726 SELENOHQ8IZQ5 122 aaKnown RBP16.67■□□□□ 0.26
RETREG3-202ENST00000585726 CADM3Q8N126 398 aa16.67■□□□□ 0.26
RETREG3-202ENST00000585726 CENPSQ8N2Z9 138 aa16.67■□□□□ 0.26
RETREG3-202ENST00000585726 OR10W1Q8NGF6 305 aa16.67■□□□□ 0.26
RETREG3-202ENST00000585726 C4orf3Q8WVX3 66 aa16.67■□□□□ 0.26
RETREG3-202ENST00000585726 RRNAD1Q96FB5 475 aaKnown RBP16.67■□□□□ 0.26
RETREG3-202ENST00000585726 QTRT1Q9BXR0 403 aaKnown RBP16.67■□□□□ 0.26
RETREG3-202ENST00000585726 ALX4Q9H161 411 aaPredicted RBP16.67■□□□□ 0.26
RETREG3-202ENST00000585726 FLVCR2Q9UPI3 526 aa16.67■□□□□ 0.26
RETREG3-202ENST00000585726 C15orf61A6NNL5 157 aa16.66■□□□□ 0.26
RETREG3-202ENST00000585726 H3BUA1 57 aa16.66■□□□□ 0.26
RETREG3-202ENST00000585726 LYRM1O43325 122 aa16.66■□□□□ 0.26
RETREG3-202ENST00000585726 NDUFB6O95139 128 aa16.66■□□□□ 0.26
RETREG3-202ENST00000585726 TRAPPC2P0DI81 140 aa16.66■□□□□ 0.26
RETREG3-202ENST00000585726 TRAPPC2BP0DI82 140 aa16.66■□□□□ 0.26
RETREG3-202ENST00000585726 VAMP1P23763 118 aa16.66■□□□□ 0.26
RETREG3-202ENST00000585726 SUPT4H1P63272 117 aaKnown RBP16.66■□□□□ 0.26
RETREG3-202ENST00000585726 TMEM187Q14656 261 aa16.66■□□□□ 0.26
RETREG3-202ENST00000585726 RBPMSQ93062 196 aaKnown RBP16.66■□□□□ 0.26
RETREG3-202ENST00000585726 GALNT14Q96FL9 552 aa16.66■□□□□ 0.26
RETREG3-202ENST00000585726 FKBP11Q9NYL4 201 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms