RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 KIR2DS2P43631 304 aa11.72□□□□□ -0.53
CDK5RAP3-237ENST00000585163 SDSLQ96GA7 329 aa11.72□□□□□ -0.53
CDK5RAP3-237ENST00000585163 NOL4LQ96MY1 436 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-237ENST00000585163 NPVFQ9HCQ7 196 aa11.72□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TCF19Q9Y242 345 aa11.72□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TNFSF13O75888 250 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 CCKARP32238 428 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 MSMPQ1L6U9 139 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 GBGT1Q8N5D6 347 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 ZNRF1Q8ND25 227 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 SGMS2Q8NHU3 365 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TRAPPC1Q9Y5R8 145 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 HEATR1Q9H583 2144 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 PCNX2A6NKB5 2137 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 IGFL2Q6UWQ7 119 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 C1orf229Q6ZS94 237 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 FAM169BQ8N8A8 192 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 CHODLQ9H9P2 273 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 ELOVL5Q9NYP7 299 aa11.71□□□□□ -0.53
CDK5RAP3-237ENST00000585163 SPENQ96T58 3664 aaKnown RBP11.71□□□□□ -0.54
CDK5RAP3-237ENST00000585163 IGHV3OR15-7A0A075B7D8 119 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 C15orf61A6NNL5 157 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 ZNF705GA8MUZ8 300 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 CGAP01215 116 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 LRP11Q86VZ4 500 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 OR4S2Q8NH73 311 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 STARD4Q96DR4 205 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 CALYQ9NYX4 217 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 MDFIC2A0A1B0GVS7 189 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 SCO2A0A1W2PP80 73 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 ITGB1BP1O14713 200 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 CGB3P0DN86 165 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 CGB7P0DN87 165 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 ARSJQ5FYB0 599 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 BHLHA15Q7RTS1 189 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 SSMEM1Q8WWF3 244 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 SLC25A15Q9Y619 301 aa11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 INTS1Q8N201 2190 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-237ENST00000585163 TRAV17A0A0B4J275 112 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 M0R296 226 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 IL6RP08887 468 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 TIMP3P35625 211 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 RAB7AP51149 207 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 SPRNQ5BIV9 151 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 UTF1Q5T230 341 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 MRPL41Q8IXM3 137 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 OR2V2Q96R30 315 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 TMEM204Q9BSN7 226 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 SEPSECSQ9HD40 501 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 DKK4Q9UBT3 224 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 PROCRQ9UNN8 238 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 YTHDF2Q9Y5A9 579 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 HSBP1L1C9JCN9 74 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 GCHFRP30047 84 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 SRSF6Q13247 344 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 EFNB3Q15768 340 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 LBHQ53QV2 105 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 TEX38Q6PEX7 206 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 OCC1Q8TAD7 63 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 TMEM14BQ9NUH8 114 aa11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 FOXA2Q9Y261 457 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-237ENST00000585163 AHRRA9YTQ3 701 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 LHBP01229 141 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 C17orf58Q2M2W7 97 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 OR4A47Q6IF82 309 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 STPG3Q8N7X2 389 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 SLC24A4Q8NFF2 622 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 NDUFAF3Q9BU61 184 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 NPY1RP25929 384 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 YPEL3P61236 119 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 HSPE1P61604 102 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 RHOBP62745 196 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 RPL31P62899 125 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 IQCJQ1A5X6 159 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 CT45A1Q5HYN5 189 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 MOGAT3Q86VF5 341 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 BEND2Q8NDZ0 799 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 CT45A3Q8NHU0 189 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 LEAP2Q969E1 77 aa11.68□□□□□ -0.54
CDK5RAP3-237ENST00000585163 SAA2-SAA4A0A096LPE2 208 aa11.67□□□□□ -0.54
CDK5RAP3-237ENST00000585163 SAA2P0DJI9 122 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-237ENST00000585163 RPL29P47914 159 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-237ENST00000585163 RAB31Q13636 194 aa11.67□□□□□ -0.54
CDK5RAP3-237ENST00000585163 SPATA31B1PQ5VZV4 182 aa11.67□□□□□ -0.54
CDK5RAP3-237ENST00000585163 TMEM256Q8N2U0 113 aa11.67□□□□□ -0.54
CDK5RAP3-237ENST00000585163 C11orf52Q96A22 123 aa11.67□□□□□ -0.54
CDK5RAP3-237ENST00000585163 C2orf88Q9BSF0 95 aa11.67□□□□□ -0.54
CDK5RAP3-237ENST00000585163 KBTBD11-OT1A0A1B0GTJ5 212 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 CA2P00918 260 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 THBS3P49746 956 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 TCF23Q7RTU1 214 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 RAB9BQ9NP90 201 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 TRAV9-1A0A075B6T8 112 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 MT-CO2P00403 227 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 OR4A8P0C604 315 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 HNF1AP20823 631 aa11.66□□□□□ -0.54
CDK5RAP3-237ENST00000585163 ZNF83P51522 516 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms