RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 CCL19Q99731 98 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 FOXJ2Q9P0K8 574 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 A0A1W2PQM1 296 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 PDLIM4P50479 330 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 C1QTNF12Q5T7M4 302 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 WDR82Q6UXN9 313 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TMEM101Q96IK0 257 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 PRELID3AQ96N28 172 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TNFRSF18Q9Y5U5 241 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 SLC17A3O00476 420 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 UCP3P55916 312 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 LINC00518Q8N0U6 118 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 LINC01560Q8TB33 94 aa11.27□□□□□ -0.61
RAB11FIP4-210ENST00000585058 IFITM2Q01629 132 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 SP7Q8TDD2 431 aaPredicted RBP11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 SAP25Q8TEE9 199 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 C14orf144Q96I85 54 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 NPCDR1Q9BY65 106 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 CGAP01215 116 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 RGPD4Q7Z3J3 1758 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 NPIPB4C9JG80 1138 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 NPIPB9F8W1W9 429 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 NPIPB7O75200 414 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 ST6GALNAC6Q969X2 333 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 SMAD7O15105 426 aaKnown RBP11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 FHL5Q5TD97 284 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 LINC01590Q5TEZ4 76 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 LINC00469Q8N7U9 141 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 SCARF2Q96GP6 870 aaPredicted RBP11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 RCC1LQ96I51 464 aaKnown RBP11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 ALKBH7Q9BT30 221 aaPredicted RBP11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 RPRMQ9NS64 109 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 PEF1Q9UBV8 284 aaKnown RBP11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 CCDC88CQ9P219 2028 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 PRR19A6NJB7 356 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 PCOLCEQ15113 449 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TMEM54Q969K7 222 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 NUDT11Q96G61 164 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 IMMP2LQ96T52 175 aa11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 PSMG3Q9BT73 122 aaPredicted RBP11.26□□□□□ -0.61
RAB11FIP4-210ENST00000585058 PLXNB2O15031 1838 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 APOHP02749 345 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 EIF4EBP2Q13542 120 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TGFAP01135 160 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 ASIPP42127 132 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 CD69Q07108 199 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 FOXA2Q9Y261 457 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 NBEAP1P0C6P0 100 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TFF3Q07654 80 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 FBXL15Q9H469 300 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 IGHMP01871 453 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 PCP4P48539 62 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TEX45Q8NA69 505 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 DNASE2BQ8WZ79 361 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 JKAMPQ9P055 326 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 PILRBQ9UKJ0 227 aa11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TBL2Q9Y4P3 447 aaKnown RBP11.25□□□□□ -0.61
RAB11FIP4-210ENST00000585058 IGFBP2P18065 325 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 ZNF600Q6ZNG1 722 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 REC114Q7Z4M0 266 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 ZNF638Q14966 1978 aaKnown RBP11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 COL11A1P12107 1806 aaPredicted RBP11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 IGHV3OR16-8A0A075B7F1 116 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 ITLN2Q8WWU7 325 aaPredicted RBP11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 SCGB3A1Q96QR1 104 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TMEM250H0YL14 139 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 CYB5R2Q6BCY4 276 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TTC9CQ8N5M4 171 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 IFI27L2Q9H2X8 130 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 SCO2A0A1W2PP80 73 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 B9A039 149 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 FOXH1O75593 365 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 GPX4P36969 197 aaPredicted RBP11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 LOXL4Q96JB6 756 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TOMM7Q9P0U1 55 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 COLQQ9Y215 455 aaPredicted RBP11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 VENTXO95231 258 aa11.24□□□□□ -0.61
RAB11FIP4-210ENST00000585058 H7C1H1 209 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 EGR4Q05215 589 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 C1QL2Q7Z5L3 287 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 ZNF318Q5VUA4 2279 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 A0A1B0GWB2 263 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 MPTX1A8MV57 137 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 NUTF2P61970 127 aaKnown RBP11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TUBA4BQ9H853 241 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 IL36BQ9NZH7 164 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 PEX7O00628 323 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 TBR1Q16650 682 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 FAM201AQ5SY85 155 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 C2orf88Q9BSF0 95 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 FBXL7Q9UJT9 491 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 ZNFX1Q9P2E3 1918 aaKnown RBP11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 MCM3APO60318 1980 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 C12orf77C9JDV5 145 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 PROB1E7EW31 1015 aa11.23□□□□□ -0.61
RAB11FIP4-210ENST00000585058 CTHRC1Q96CG8 243 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms