RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 NAT1P18440 290 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 LINC00205P59089 165 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 LGALS9CQ6DKI2 356 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 SIGIRRQ6IA17 410 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 ZNF343Q6P1L6 599 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 GRPEL2Q8TAA5 225 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 YPEL2Q96QA6 119 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 PRRT1Q99946 306 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 PEF1Q9UBV8 284 aaKnown RBP13.57□□□□□ -0.24
TOP3A-220ENST00000585031 JPT1Q9UK76 154 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 ELF5Q9UKW6 265 aaPredicted RBP13.57□□□□□ -0.24
TOP3A-220ENST00000585031 KCNK7Q9Y2U2 307 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 SELENOKQ9Y6D0 94 aa13.57□□□□□ -0.24
TOP3A-220ENST00000585031 FUT3P21217 361 aa13.56□□□□□ -0.24
TOP3A-220ENST00000585031 TAS2R46P59540 309 aa13.56□□□□□ -0.24
TOP3A-220ENST00000585031 HTD2P86397 168 aa13.56□□□□□ -0.24
TOP3A-220ENST00000585031 MRPL30Q8TCC3 161 aaKnown RBP13.56□□□□□ -0.24
TOP3A-220ENST00000585031 SLC25A21Q9BQT8 299 aaPredicted RBP13.56□□□□□ -0.24
TOP3A-220ENST00000585031 GINS4Q9BRT9 223 aa13.56□□□□□ -0.24
TOP3A-220ENST00000585031 SPACA1Q9HBV2 294 aa13.56□□□□□ -0.24
TOP3A-220ENST00000585031 C7orf66A4D0T2 115 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 PROP1O75360 226 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 CCNKO75909 580 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 DTYMKP23919 212 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 PJVKQ0ZLH3 352 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 FXYD3Q14802 87 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 LY6G6FQ5SQ64 297 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 FAAP20Q6NZ36 180 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 TRAT1Q6PIZ9 186 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 C6orf201Q7Z4U5 140 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 HOGA1Q86XE5 327 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 OR51S1Q8NGJ8 323 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 OR2K2Q8NGT1 345 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 OR5H2Q8NGV7 314 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 CMSS1Q9BQ75 279 aaKnown RBP13.55□□□□□ -0.24
TOP3A-220ENST00000585031 GPN1Q9HCN4 374 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-220ENST00000585031 RAB9BQ9NP90 201 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 SLC2A8Q9NY64 477 aa13.55□□□□□ -0.24
TOP3A-220ENST00000585031 A0A0B4J293 547 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 A0A0G2JLM5 398 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 M0QYG6 137 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 FCER2P06734 321 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 PRR20EP86478 221 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 PRR20CP86479 221 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 PRR20DP86480 221 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 PRR20BP86481 221 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 PRR20AP86496 221 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 DEFB114Q30KQ6 69 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 TMEM17Q86X19 198 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 GVQW1Q8N7I0 195 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 OR5AN1Q8NGI8 311 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 ABHD14BQ96IU4 210 aa13.54□□□□□ -0.24
TOP3A-220ENST00000585031 TINAGL1Q9GZM7 467 aaPredicted RBP13.54□□□□□ -0.24
TOP3A-220ENST00000585031 OR5H14A6NHG9 310 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 H3BUA1 57 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 BMPR1BO00238 502 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 OR2A4O95047 310 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 IGKV1-16P04430 117 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 IL5P05113 134 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 GLAP06280 429 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 MED14OSP0DP75 135 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 HRH1P35367 487 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 RRAS2P62070 204 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-220ENST00000585031 RPEL1Q2QD12 228 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 IDO2Q6ZQW0 420 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 ARRDC1Q8N5I2 433 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 BVESQ8NE79 360 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 BEST4Q8NFU0 473 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 OR2AK2Q8NG84 335 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 OR4D10Q8NGI6 311 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 GIMAP1Q8WWP7 306 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 WDR89Q96FK6 387 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-220ENST00000585031 MED28Q9H204 178 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 AK3Q9UIJ7 227 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 KLK5Q9Y337 293 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-220ENST00000585031 WASHC3Q9Y3C0 194 aa13.53□□□□□ -0.24
TOP3A-220ENST00000585031 H7C2Y5 167 aa13.52□□□□□ -0.25
TOP3A-220ENST00000585031 RLN1P04808 185 aa13.52□□□□□ -0.25
TOP3A-220ENST00000585031 SCGB2B2Q4G0G5 96 aa13.52□□□□□ -0.25
TOP3A-220ENST00000585031 FAM71F2Q6NXP2 309 aa13.52□□□□□ -0.25
TOP3A-220ENST00000585031 DRAXINQ8NBI3 349 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-220ENST00000585031 FAAP24Q9BTP7 215 aa13.52□□□□□ -0.25
TOP3A-220ENST00000585031 C12orf4Q9NQ89 552 aa13.52□□□□□ -0.25
TOP3A-220ENST00000585031 ZNF221Q9UK13 617 aa13.52□□□□□ -0.25
TOP3A-220ENST00000585031 PMP2P02689 132 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 ZNF735P0CB33 412 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 ARPC4P59998 168 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 CBX3Q13185 183 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 GUCA2BQ16661 112 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 LYG2Q86SG7 212 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 SNAPC3Q92966 411 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 SCGB3A2Q96PL1 93 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 RNF5Q99942 180 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 SULT4A1Q9BR01 284 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 AGMATQ9BSE5 352 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 ZC4H2Q9NQZ6 224 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 KCNIP1Q9NZI2 227 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 FLVCR2Q9UPI3 526 aa13.51□□□□□ -0.25
TOP3A-220ENST00000585031 SNRPGP15A8MWD9 76 aa13.5□□□□□ -0.25
TOP3A-220ENST00000585031 BOLA2-SMG1P6H3BVE0 249 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms