RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 M0QYG6 137 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 AREGP15514 252 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 SPNP16150 400 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 LPAR6P43657 344 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 TATDN3Q17R31 274 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 RPEL1Q2QD12 228 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 C19orf35Q6ZS72 473 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 OR52I2Q8NH67 350 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 COMMD5Q9GZQ3 224 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 KLK11Q9UBX7 282 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 FBXL7Q9UJT9 491 aa15.65■□□□□ 0.1
SS18-224ENST00000584083 DHFRP00374 187 aa15.64■□□□□ 0.09
SS18-224ENST00000584083 IFNA6P05013 189 aa15.64■□□□□ 0.09
SS18-224ENST00000584083 REG1AP05451 166 aa15.64■□□□□ 0.09
SS18-224ENST00000584083 PSMB6P28072 239 aa15.64■□□□□ 0.09
SS18-224ENST00000584083 C15orf32Q32M92 178 aa15.64■□□□□ 0.09
SS18-224ENST00000584083 RAB2BQ8WUD1 216 aa15.64■□□□□ 0.09
SS18-224ENST00000584083 C15orf40Q8WUR7 153 aa15.64■□□□□ 0.09
SS18-224ENST00000584083 FCAMRQ8WWV6 532 aa15.64■□□□□ 0.09
SS18-224ENST00000584083 KRASP01116 189 aa15.63■□□□□ 0.09
SS18-224ENST00000584083 DEFA4P12838 97 aa15.63■□□□□ 0.09
SS18-224ENST00000584083 OR2B8PP59922 312 aa15.63■□□□□ 0.09
SS18-224ENST00000584083 RNASE10Q5GAN6 216 aaKnown RBP15.63■□□□□ 0.09
SS18-224ENST00000584083 VAX1Q5SQQ9 334 aa15.63■□□□□ 0.09
SS18-224ENST00000584083 HAPLN4Q86UW8 402 aa15.63■□□□□ 0.09
SS18-224ENST00000584083 OR9G4Q8NGQ1 327 aa15.63■□□□□ 0.09
SS18-224ENST00000584083 ABHD1Q96SE0 405 aa15.63■□□□□ 0.09
SS18-224ENST00000584083 MIXL1Q9H2W2 232 aa15.63■□□□□ 0.09
SS18-224ENST00000584083 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.62■□□□□ 0.09
SS18-224ENST00000584083 CGB1A6NKQ9 187 aa15.62■□□□□ 0.09
SS18-224ENST00000584083 MARCH11A6NNE9 402 aa15.62■□□□□ 0.09
SS18-224ENST00000584083 CTDSP2O14595 271 aa15.62■□□□□ 0.09
SS18-224ENST00000584083 TPPPO94811 219 aa15.62■□□□□ 0.09
SS18-224ENST00000584083 CRYGCP07315 174 aa15.62■□□□□ 0.09
SS18-224ENST00000584083 CTRB1P17538 263 aa15.62■□□□□ 0.09
SS18-224ENST00000584083 TMBIM6P55061 237 aa15.62■□□□□ 0.09
SS18-224ENST00000584083 ZNF585BQ52M93 769 aa15.62■□□□□ 0.09
SS18-224ENST00000584083 CTRB2Q6GPI1 263 aa15.62■□□□□ 0.09
SS18-224ENST00000584083 SLC38A6Q8IZM9 456 aa15.62■□□□□ 0.09
SS18-224ENST00000584083 MTFP1Q9UDX5 166 aa15.62■□□□□ 0.09
SS18-224ENST00000584083 BMPR1BO00238 502 aa15.61■□□□□ 0.09
SS18-224ENST00000584083 NOL3O60936 208 aaKnown RBP15.61■□□□□ 0.09
SS18-224ENST00000584083 NDUFB8O95169 186 aa15.61■□□□□ 0.09
SS18-224ENST00000584083 GP9P14770 177 aa15.61■□□□□ 0.09
SS18-224ENST00000584083 HIST1H1BP16401 226 aaKnown RBP15.61■□□□□ 0.09
SS18-224ENST00000584083 G6PCP35575 357 aa15.61■□□□□ 0.09
SS18-224ENST00000584083 UCP3P55916 312 aa15.61■□□□□ 0.09
SS18-224ENST00000584083 FAM209BQ5JX69 171 aa15.61■□□□□ 0.09
SS18-224ENST00000584083 C11orf87Q6NUJ2 197 aa15.61■□□□□ 0.09
SS18-224ENST00000584083 TBC1D26Q86UD7 250 aa15.61■□□□□ 0.09
SS18-224ENST00000584083 LAX1Q8IWV1 398 aa15.61■□□□□ 0.09
SS18-224ENST00000584083 FANCD2OSQ96PS1 177 aa15.61■□□□□ 0.09
SS18-224ENST00000584083 QTRT1Q9BXR0 403 aaKnown RBP15.61■□□□□ 0.09
SS18-224ENST00000584083 COL7A1Q02388 2944 aa15.61■□□□□ 0.09
SS18-224ENST00000584083 SNAPC5O75971 98 aa15.6■□□□□ 0.09
SS18-224ENST00000584083 IGLV1-51P01701 117 aa15.6■□□□□ 0.09
SS18-224ENST00000584083 CD3DP04234 171 aa15.6■□□□□ 0.09
SS18-224ENST00000584083 PGAM2P15259 253 aa15.6■□□□□ 0.09
SS18-224ENST00000584083 RPL5P46777 297 aaKnown RBP15.6■□□□□ 0.09
SS18-224ENST00000584083 BCL7BQ9BQE9 202 aa15.6■□□□□ 0.09
SS18-224ENST00000584083 SMAD5-AS1Q9Y6J3 95 aa15.6■□□□□ 0.09
SS18-224ENST00000584083 S4R3C0 116 aa15.6■□□□□ 0.09
SS18-224ENST00000584083 IGLC7A0M8Q6 106 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 PPP5D1E7EU14 171 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 IGHV3-23P01764 117 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 FGF2P09038 288 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 TRAPPC2P0DI81 140 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 TRAPPC2BP0DI82 140 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 TBPP20226 339 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 IL34Q6ZMJ4 242 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 OR10W1Q8NGF6 305 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 OR1L8Q8NGR8 309 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 DYNC2LI1Q8TCX1 351 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 EEF1AKMT3Q96AZ1 226 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 SRSF8Q9BRL6 282 aaKnown RBP15.59■□□□□ 0.09
SS18-224ENST00000584083 HINT2Q9BX68 163 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 PEMTQ9UBM1 199 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 NSG2Q9Y328 171 aa15.59■□□□□ 0.09
SS18-224ENST00000584083 TEX50A0A1B0GTY4 177 aa15.58■□□□□ 0.08
SS18-224ENST00000584083 GABARAPH6UMI1 98 aa15.58■□□□□ 0.08
SS18-224ENST00000584083 ARRDC1Q8N5I2 433 aa15.58■□□□□ 0.08
SS18-224ENST00000584083 TMEM229BQ8NBD8 167 aa15.58■□□□□ 0.08
SS18-224ENST00000584083 FAM212BQ9NTI7 297 aaPredicted RBP15.58■□□□□ 0.08
SS18-224ENST00000584083 CCDC59Q9P031 241 aaKnown RBP15.58■□□□□ 0.08
SS18-224ENST00000584083 OR51B2Q9Y5P1 312 aa15.58■□□□□ 0.08
SS18-224ENST00000584083 IGLV11-55A0A075B6I3 123 aa15.57■□□□□ 0.08
SS18-224ENST00000584083 GGCTO75223 188 aaKnown RBP15.57■□□□□ 0.08
SS18-224ENST00000584083 CSN3P07498 182 aa15.57■□□□□ 0.08
SS18-224ENST00000584083 PI3P19957 117 aa15.57■□□□□ 0.08
SS18-224ENST00000584083 TAS2R19P59542 299 aa15.57■□□□□ 0.08
SS18-224ENST00000584083 THOC7Q6I9Y2 204 aaKnown RBP15.57■□□□□ 0.08
SS18-224ENST00000584083 CLEC19AQ6UXS0 136 aa15.57■□□□□ 0.08
SS18-224ENST00000584083 CADM3Q8N126 398 aa15.57■□□□□ 0.08
SS18-224ENST00000584083 DIRAS2Q96HU8 199 aa15.57■□□□□ 0.08
SS18-224ENST00000584083 ASCL2Q99929 193 aa15.57■□□□□ 0.08
SS18-224ENST00000584083 CYB5BO43169 146 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 OR2C1O95371 312 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 RAB3DO95716 219 aa15.56■□□□□ 0.08
SS18-224ENST00000584083 HLA-AP01891 365 aaKnown RBP15.56■□□□□ 0.08
SS18-224ENST00000584083 SERPINE2P07093 398 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms