RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 MARVELD3Q96A59 401 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 CLCC1Q96S66 551 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 AIFM2Q9BRQ8 373 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 HINT2Q9BX68 163 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 TPSG1Q9NRR2 321 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 DOPEY2Q9Y3R5 2298 aa11.96□□□□□ -0.49
CDK5RAP3-218ENST00000580391 IGHV4-30-2A0A087WSY4 118 aa11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 VWC2LB2RUY7 222 aa11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 SLC25A17O43808 307 aa11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 IFNA5P01569 189 aa11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 FGF2P09038 288 aa11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PXDC1Q5TGL8 231 aa11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 Q6ZRG5 221 aa11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 C1orf122Q6ZSJ8 110 aa11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 TMEM170AQ8WVE7 144 aa11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 C17orf50Q8WW18 174 aa11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 HIPK2Q9H2X6 1198 aa11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 UNKLQ9H9P5 680 aaKnown RBP11.96□□□□□ -0.5
CDK5RAP3-218ENST00000580391 POLQO75417 2590 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PTPN13Q12923 2485 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 RRHO14718 337 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 IFNA10P01566 189 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 CNTFRP26992 372 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 FHITP49789 147 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 TOR2AQ5JU69 321 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 OR2G3Q8NGZ4 309 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 TMEM167AQ8TBQ9 72 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 DPM3Q9P2X0 92 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 ZNF257Q9Y2Q1 563 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 HILPDAQ9Y5L2 63 aa11.95□□□□□ -0.5
CDK5RAP3-218ENST00000580391 SVEP1Q4LDE5 3571 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 TEX50A0A1B0GTY4 177 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 NDUFS8O00217 210 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 FOXH1O75593 365 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 USF1P22415 310 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 RPL8P62917 257 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PRCDQ00LT1 54 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 C10orf55Q5SWW7 151 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 THNSL2Q86YJ6 484 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 OR10P1Q8NGE3 313 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 VSTM2AQ8TAG5 236 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 SAT2Q96F10 170 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 TBX15Q96SF7 602 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 RSG1Q9BU20 258 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 CACFD1Q9UGQ2 172 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 MAP1AP78559 2803 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 I3L521 148 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 TIMM23O14925 209 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 LY86O95711 162 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 OR8U8P0C7N1 319 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 VMA21Q3ZAQ7 101 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 GNPNAT1Q96EK6 184 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 WDR61Q9GZS3 305 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 ZNF430Q9H8G1 570 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PLEKHA3Q9HB20 300 aa11.94□□□□□ -0.5
CDK5RAP3-218ENST00000580391 TOX4O94842 621 aa11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 DVL1P1P54792 670 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 MRGPRG-AS1Q2M3A8 158 aa11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 LRRC75BQ2VPJ9 315 aa11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 ZNF787Q6DD87 383 aa11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 HSD17B13Q7Z5P4 300 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 SLC24A4Q8NFF2 622 aa11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 OR5B3Q8NH48 314 aa11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PINX1Q96BK5 328 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 TMEM147Q9BVK8 224 aa11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 HRH4Q9H3N8 390 aa11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 ENY2Q9NPA8 101 aa11.93□□□□□ -0.5
CDK5RAP3-218ENST00000580391 E7EUB6 86 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PLA2G2AP14555 144 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 NPY1RP25929 384 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 LGALS7P47929 136 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 KRTAP10-9P60411 292 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PJVKQ0ZLH3 352 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 ETV3LQ6ZN32 361 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 OR10W1Q8NGF6 305 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 OR4A5Q8NH83 315 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 SCGB1C1Q8TD33 95 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 CFHR4Q92496 578 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 COMMD5Q9GZQ3 224 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PARP11Q9NR21 331 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 UQCC1Q9NVA1 299 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 FKBP11Q9NYL4 201 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 ABCA12Q86UK0 2595 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 CGB1A6NKQ9 187 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PRSS46E5RG02 174 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 VENTXO95231 258 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 CA2P00918 260 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PRH1P02810 166 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 CEACAM3P40198 252 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 CAMLGP49069 296 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 RPP30P78346 268 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 ZNF616Q08AN1 781 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 HNF4GQ14541 408 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 ATP6V1FQ16864 119 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 DYNAPQ8N1N2 210 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 FBXO7Q9Y3I1 522 aa11.92□□□□□ -0.5
CDK5RAP3-218ENST00000580391 BLOC1S1P78537 153 aa11.91□□□□□ -0.5
CDK5RAP3-218ENST00000580391 PSG5Q15238 335 aa11.91□□□□□ -0.5
CDK5RAP3-218ENST00000580391 SSX2Q16385 188 aa11.91□□□□□ -0.5
CDK5RAP3-218ENST00000580391 VWC2Q2TAL6 325 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms