RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 S1PR2O95136 353 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 DHFRP00374 187 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 SERPINE2P07093 398 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 ZNF735P0CB33 412 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 RAB25P57735 213 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 AP3S2P59780 193 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 ZNF585BQ52M93 769 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 FAM209BQ5JX69 171 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 THOC7Q6I9Y2 204 aaKnown RBP12.73□□□□□ -0.37
IFT20-210ENST00000580357 C1QL4Q86Z23 238 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 ADAD2Q8NCV1 583 aaKnown RBP12.73□□□□□ -0.37
IFT20-210ENST00000580357 SCGB3A2Q96PL1 93 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 DUX3Q96PT4 197 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 TSC22D3Q99576 134 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 PRRT1Q99946 306 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 SCP2D1Q9UJQ7 156 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 ZNF257Q9Y2Q1 563 aa12.73□□□□□ -0.37
IFT20-210ENST00000580357 FAM223BA6NKX1 122 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 NPIPB5A8MRT5 1133 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 LINC01619G3V211 115 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 KRASP01116 189 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 FAUP35544 74 aaKnown RBP12.72□□□□□ -0.37
IFT20-210ENST00000580357 PIGPP57054 158 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 DEFB136Q30KP8 78 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 PYDC2Q56P42 97 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 SPANXN2Q5MJ10 180 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 HSD17B13Q7Z5P4 300 aaPredicted RBP12.72□□□□□ -0.37
IFT20-210ENST00000580357 FAM223AQ8IWN6 122 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 OR4D10Q8NGI6 311 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 CASTOR1Q8WTX7 329 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 DEDD2Q8WXF8 326 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 FYTTD1Q96QD9 318 aaKnown RBP12.72□□□□□ -0.37
IFT20-210ENST00000580357 OR5B12Q96R08 314 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 RANGRFQ9HD47 186 aaPredicted RBP12.72□□□□□ -0.37
IFT20-210ENST00000580357 TMEM140Q9NV12 185 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 COPZ2Q9P299 210 aa12.72□□□□□ -0.37
IFT20-210ENST00000580357 C14orf166Q9Y224 244 aaKnown RBP12.72□□□□□ -0.37
IFT20-210ENST00000580357 TRBV9A0A0B4J1U6 114 aa12.71□□□□□ -0.37
IFT20-210ENST00000580357 CTSDP07339 412 aaPredicted RBP12.71□□□□□ -0.37
IFT20-210ENST00000580357 CCDC190Q86UF4 302 aa12.71□□□□□ -0.37
IFT20-210ENST00000580357 OR1L8Q8NGR8 309 aa12.71□□□□□ -0.37
IFT20-210ENST00000580357 PRNDQ9UKY0 176 aa12.71□□□□□ -0.37
IFT20-210ENST00000580357 TNCP24821 2201 aa12.71□□□□□ -0.37
IFT20-210ENST00000580357 C3orf85A0A1B0GTC6 90 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 TEX22C9J3V5 150 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 CYB5BO43169 146 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 CRYGCP07315 174 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 APELAP0DMC3 54 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 HIST1H1BP16401 226 aaKnown RBP12.7□□□□□ -0.38
IFT20-210ENST00000580357 G6PCP35575 357 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 ETV6P41212 452 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 INSL3P51460 131 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 OR2B8PP59922 312 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 ATP5G2Q06055 141 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 C9orf66Q5T8R8 295 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 FOXB2Q5VYV0 432 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 ZNF343Q6P1L6 599 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 H2BFWTQ7Z2G1 175 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 Q8N402 240 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 NECAP1Q8NC96 275 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 OR4C16Q8NGL9 310 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 MARCH1Q8TCQ1 289 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 SLC2A8Q9NY64 477 aa12.7□□□□□ -0.38
IFT20-210ENST00000580357 HMX3A6NHT5 357 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 H0Y980 276 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 IGHV3-11P01762 117 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 TRAPPC2P0DI81 140 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 TRAPPC2BP0DI82 140 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 ZP3P21754 424 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 PSMB6P28072 239 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 PPP5CP53041 499 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 KLK9Q2XQG4 91 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 C10orf55Q5SWW7 151 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 TOMM5Q8N4H5 51 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 OR13C8Q8NGS7 320 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 OR5B3Q8NH48 314 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 SEC22AQ96IW7 307 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 QTRT1Q9BXR0 403 aaKnown RBP12.69□□□□□ -0.38
IFT20-210ENST00000580357 KLK9Q9UKQ9 250 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 GPR132Q9UNW8 380 aa12.69□□□□□ -0.38
IFT20-210ENST00000580357 TRAV3A0A0B4J244 114 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 TEX50A0A1B0GTY4 177 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 E7EUB6 86 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 OVOL1O14753 267 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 DEFA4P12838 97 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 CTRB1P17538 263 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 PI3P19957 117 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 RHOGP84095 191 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 TATDN3Q17R31 274 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 CTRB2Q6GPI1 263 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 GDPD1Q8N9F7 314 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 OR51S1Q8NGJ8 323 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 TMEM56Q96MV1 263 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 ALX4Q9H161 411 aaPredicted RBP12.68□□□□□ -0.38
IFT20-210ENST00000580357 THYN1Q9P016 225 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 PEF1Q9UBV8 284 aaKnown RBP12.68□□□□□ -0.38
IFT20-210ENST00000580357 KCNIP3Q9Y2W7 256 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 V9GYH0 126 aa12.68□□□□□ -0.38
IFT20-210ENST00000580357 TEX13DA0A0J9YY54 714 aaPredicted RBP12.67□□□□□ -0.38
IFT20-210ENST00000580357 DHODHQ02127 395 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms