RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 OR11H1Q8NG94 326 aa12.67□□□□□ -0.38
RARA-209ENST00000579727 OR6Q1Q8NGQ2 317 aa12.67□□□□□ -0.38
RARA-209ENST00000579727 TRIM63Q969Q1 353 aa12.67□□□□□ -0.38
RARA-209ENST00000579727 MCUBQ9NWR8 336 aa12.67□□□□□ -0.38
RARA-209ENST00000579727 NSG2Q9Y328 171 aa12.67□□□□□ -0.38
RARA-209ENST00000579727 RYR3Q15413 4870 aa12.67□□□□□ -0.38
RARA-209ENST00000579727 CGB1A6NKQ9 187 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 IGKV1-39P01597 117 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 IGKV1D-39P04432 117 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 REG1AP05451 166 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 OR9G9P0C7N8 305 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 SPANXN2Q5MJ10 180 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 OR4A5Q8NH83 315 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 ZNF486Q96H40 463 aaPredicted RBP12.66□□□□□ -0.38
RARA-209ENST00000579727 TP53RKQ96S44 253 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 SPIN2AQ99865 258 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 SPIN2BQ9BPZ2 258 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 AIFM2Q9BRQ8 373 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 SLA2Q9H6Q3 261 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 COPZ2Q9P299 210 aa12.66□□□□□ -0.38
RARA-209ENST00000579727 RBMXL2O75526 392 aaKnown RBP12.65□□□□□ -0.38
RARA-209ENST00000579727 PRB2P02812 416 aaPredicted RBP12.65□□□□□ -0.38
RARA-209ENST00000579727 LGALS1P09382 135 aaKnown RBP12.65□□□□□ -0.38
RARA-209ENST00000579727 AREGP15514 252 aa12.65□□□□□ -0.38
RARA-209ENST00000579727 MAS1LP35410 378 aa12.65□□□□□ -0.38
RARA-209ENST00000579727 OR2B8PP59922 312 aa12.65□□□□□ -0.38
RARA-209ENST00000579727 RND3P61587 244 aa12.65□□□□□ -0.38
RARA-209ENST00000579727 WFDC9Q8NEX5 89 aa12.65□□□□□ -0.38
RARA-209ENST00000579727 OR1N2Q8NGR9 330 aa12.65□□□□□ -0.38
RARA-209ENST00000579727 ZFAND1Q8TCF1 268 aa12.65□□□□□ -0.38
RARA-209ENST00000579727 TMEM68Q96MH6 324 aa12.65□□□□□ -0.38
RARA-209ENST00000579727 IGHV4OR15-8A0A075B7B6 117 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 A0A087WW49 117 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 C3orf85A0A1B0GTC6 90 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 H3BUA1 57 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 CTSDP07339 412 aaPredicted RBP12.64□□□□□ -0.39
RARA-209ENST00000579727 ZNF45Q02386 682 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 FHL3Q13643 280 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 KLF9Q13886 244 aaPredicted RBP12.64□□□□□ -0.39
RARA-209ENST00000579727 BEAN1Q3B7T3 259 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 SP6Q3SY56 376 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 TOMM5Q8N4H5 51 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 CCDC71LQ8N9Z2 235 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 PRRT1Q99946 306 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 SRRQ9GZT4 340 aa12.64□□□□□ -0.39
RARA-209ENST00000579727 C14orf166Q9Y224 244 aaKnown RBP12.64□□□□□ -0.39
RARA-209ENST00000579727 C13orf42A0A1B0GVH6 325 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 ANKRD34BA5PLL1 514 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 H0Y980 276 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 SERPINE2P07093 398 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 ETV6P41212 452 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 SLURP1P55000 103 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 RUNX1Q01196 453 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 ZNF616Q08AN1 781 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 IZUMO4Q1ZYL8 232 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 TTC9CQ8N5M4 171 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 SEC22AQ96IW7 307 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 RTBDNQ9BSG5 229 aaPredicted RBP12.63□□□□□ -0.39
RARA-209ENST00000579727 HINT2Q9BX68 163 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 COMMD5Q9GZQ3 224 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 C5orf66Q9H5L9 145 aa12.63□□□□□ -0.39
RARA-209ENST00000579727 DBX1A6NMT0 343 aa12.62□□□□□ -0.39
RARA-209ENST00000579727 OR2J3O76001 311 aa12.62□□□□□ -0.39
RARA-209ENST00000579727 PTBP1P26599 531 aaKnown RBP eCLIP12.62□□□□□ -0.39
RARA-209ENST00000579727 HOXD3P31249 432 aaPredicted RBP12.62□□□□□ -0.39
RARA-209ENST00000579727 ECI1P42126 302 aa12.62□□□□□ -0.39
RARA-209ENST00000579727 TRIM16LQ309B1 348 aa12.62□□□□□ -0.39
RARA-209ENST00000579727 ZNF57Q68EA5 555 aaPredicted RBP12.62□□□□□ -0.39
RARA-209ENST00000579727 OR10W1Q8NGF6 305 aa12.62□□□□□ -0.39
RARA-209ENST00000579727 DPF1Q92782 380 aa12.62□□□□□ -0.39
RARA-209ENST00000579727 RCC1LQ96I51 464 aaKnown RBP12.62□□□□□ -0.39
RARA-209ENST00000579727 AKIP1Q9NQ31 210 aa12.62□□□□□ -0.39
RARA-209ENST00000579727 SLC2A8Q9NY64 477 aa12.62□□□□□ -0.39
RARA-209ENST00000579727 SCP2D1Q9UJQ7 156 aa12.62□□□□□ -0.39
RARA-209ENST00000579727 GPR132Q9UNW8 380 aa12.62□□□□□ -0.39
RARA-209ENST00000579727 TEX13DA0A0J9YY54 714 aaPredicted RBP12.61□□□□□ -0.39
RARA-209ENST00000579727 TEX50A0A1B0GTY4 177 aa12.61□□□□□ -0.39
RARA-209ENST00000579727 LINC01619G3V211 115 aa12.61□□□□□ -0.39
RARA-209ENST00000579727 SNAPC5O75971 98 aa12.61□□□□□ -0.39
RARA-209ENST00000579727 OR5AC1P0C628 307 aa12.61□□□□□ -0.39
RARA-209ENST00000579727 PSMB6P28072 239 aa12.61□□□□□ -0.39
RARA-209ENST00000579727 RHOGP84095 191 aa12.61□□□□□ -0.39
RARA-209ENST00000579727 BAK1Q16611 211 aa12.61□□□□□ -0.39
RARA-209ENST00000579727 H2BFWTQ7Z2G1 175 aa12.61□□□□□ -0.39
RARA-209ENST00000579727 FAM212BQ9NTI7 297 aaPredicted RBP12.61□□□□□ -0.39
RARA-209ENST00000579727 OR51B2Q9Y5P1 312 aa12.61□□□□□ -0.39
RARA-209ENST00000579727 A0A0G2JLM5 398 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 IGLC7A0M8Q6 106 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 NPIPB5A8MRT5 1133 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 IGKV1-5P01602 117 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 TRBV12-3P01733 135 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 OR8U8P0C7N1 319 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 FAUP35544 74 aaKnown RBP12.6□□□□□ -0.39
RARA-209ENST00000579727 AKR1C2P52895 323 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 AP3S2P59780 193 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 SURF2Q15527 256 aaPredicted RBP12.6□□□□□ -0.39
RARA-209ENST00000579727 SLC25A42Q86VD7 318 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 DCUN1D4Q92564 292 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 TMEM230Q96A57 120 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 SDHCQ99643 169 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms