RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 MARCH11A6NNE9 402 aa18.48■□□□□ 0.55
LIMD2-207ENST00000579329 GSTZ1O43708 216 aaPredicted RBP18.48■□□□□ 0.55
LIMD2-207ENST00000579329 FGF2P09038 288 aa18.48■□□□□ 0.55
LIMD2-207ENST00000579329 ZNF585BQ52M93 769 aa18.48■□□□□ 0.55
LIMD2-207ENST00000579329 C9orf66Q5T8R8 295 aa18.48■□□□□ 0.55
LIMD2-207ENST00000579329 USMG5Q96IX5 58 aa18.48■□□□□ 0.55
LIMD2-207ENST00000579329 AURKAIP1Q9NWT8 199 aaPredicted RBP18.48■□□□□ 0.55
LIMD2-207ENST00000579329 ZNF257Q9Y2Q1 563 aa18.48■□□□□ 0.55
LIMD2-207ENST00000579329 TRAV3A0A0B4J244 114 aa18.47■□□□□ 0.55
LIMD2-207ENST00000579329 E7EUB6 86 aa18.47■□□□□ 0.55
LIMD2-207ENST00000579329 RPA2P15927 270 aa18.47■□□□□ 0.55
LIMD2-207ENST00000579329 HOXD3P31249 432 aaPredicted RBP18.47■□□□□ 0.55
LIMD2-207ENST00000579329 PPP5CP53041 499 aa18.47■□□□□ 0.55
LIMD2-207ENST00000579329 RND3P61587 244 aa18.47■□□□□ 0.55
LIMD2-207ENST00000579329 EGFEM1PQ0D2K5 195 aa18.47■□□□□ 0.55
LIMD2-207ENST00000579329 SCGB2B2Q4G0G5 96 aa18.47■□□□□ 0.55
LIMD2-207ENST00000579329 TERB2Q8NHR7 220 aa18.47■□□□□ 0.55
LIMD2-207ENST00000579329 SOSTQ9BQB4 213 aa18.47■□□□□ 0.55
LIMD2-207ENST00000579329 FAM223BA6NKX1 122 aa18.46■□□□□ 0.55
LIMD2-207ENST00000579329 NPIPB5A8MRT5 1133 aa18.46■□□□□ 0.55
LIMD2-207ENST00000579329 SEC14L6B5MCN3 397 aa18.46■□□□□ 0.55
LIMD2-207ENST00000579329 AKAIN1P0CW23 69 aa18.46■□□□□ 0.55
LIMD2-207ENST00000579329 MYOD1P15172 320 aa18.46■□□□□ 0.55
LIMD2-207ENST00000579329 SLURP1P55000 103 aa18.46■□□□□ 0.55
LIMD2-207ENST00000579329 DEFA5Q01523 94 aa18.46■□□□□ 0.55
LIMD2-207ENST00000579329 FAM223AQ8IWN6 122 aa18.46■□□□□ 0.55
LIMD2-207ENST00000579329 CADM3Q8N126 398 aa18.46■□□□□ 0.55
LIMD2-207ENST00000579329 DCUN1D4Q92564 292 aa18.46■□□□□ 0.55
LIMD2-207ENST00000579329 COMMD5Q9GZQ3 224 aa18.46■□□□□ 0.55
LIMD2-207ENST00000579329 A0A1B0GW64 132 aa18.45■□□□□ 0.54
LIMD2-207ENST00000579329 DISC1C4P0D8 188 aa18.45■□□□□ 0.54
LIMD2-207ENST00000579329 OVOL1O14753 267 aa18.45■□□□□ 0.54
LIMD2-207ENST00000579329 KRASP01116 189 aa18.45■□□□□ 0.54
LIMD2-207ENST00000579329 PRH1P02810 166 aa18.45■□□□□ 0.54
LIMD2-207ENST00000579329 S100A5P33763 92 aa18.45■□□□□ 0.54
LIMD2-207ENST00000579329 RHOGP84095 191 aa18.45■□□□□ 0.54
LIMD2-207ENST00000579329 ZNF45Q02386 682 aa18.45■□□□□ 0.54
LIMD2-207ENST00000579329 ZFAND1Q8TCF1 268 aa18.45■□□□□ 0.54
LIMD2-207ENST00000579329 RANGRFQ9HD47 186 aaPredicted RBP18.45■□□□□ 0.54
LIMD2-207ENST00000579329 ZMAT5Q9UDW3 170 aaKnown RBP18.45■□□□□ 0.54
LIMD2-207ENST00000579329 TRBV9A0A0B4J1U6 114 aa18.44■□□□□ 0.54
LIMD2-207ENST00000579329 PI3P19957 117 aa18.44■□□□□ 0.54
LIMD2-207ENST00000579329 PTBP1P26599 531 aaKnown RBP eCLIP18.44■□□□□ 0.54
LIMD2-207ENST00000579329 G6PCP35575 357 aa18.44■□□□□ 0.54
LIMD2-207ENST00000579329 ECI1P42126 302 aa18.44■□□□□ 0.54
LIMD2-207ENST00000579329 PIGPP57054 158 aa18.44■□□□□ 0.54
LIMD2-207ENST00000579329 OR2B8PP59922 312 aa18.44■□□□□ 0.54
LIMD2-207ENST00000579329 KRTAP10-11P60412 298 aa18.44■□□□□ 0.54
LIMD2-207ENST00000579329 FAAP20Q6NZ36 180 aa18.44■□□□□ 0.54
LIMD2-207ENST00000579329 ZNF343Q6P1L6 599 aa18.44■□□□□ 0.54
LIMD2-207ENST00000579329 DLX4Q92988 240 aaPredicted RBP18.44■□□□□ 0.54
LIMD2-207ENST00000579329 AKIP1Q9NQ31 210 aa18.44■□□□□ 0.54
LIMD2-207ENST00000579329 NBEAL2Q6ZNJ1 2754 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 ANKRD20A5PA0PJZ0 165 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 ANKRD34BA5PLL1 514 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 CGB1A6NKQ9 187 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 RBMXL2O75526 392 aaKnown RBP18.43■□□□□ 0.54
LIMD2-207ENST00000579329 DHFRP00374 187 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 CRYGCP07315 174 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 AREGP15514 252 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 ZP3P21754 424 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 PSMB6P28072 239 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 THOC7Q6I9Y2 204 aaKnown RBP18.43■□□□□ 0.54
LIMD2-207ENST00000579329 CCDC71LQ8N9Z2 235 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 NECAP1Q8NC96 275 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 OR4C16Q8NGL9 310 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 OR13C8Q8NGS7 320 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 SRSF8Q9BRL6 282 aaKnown RBP18.43■□□□□ 0.54
LIMD2-207ENST00000579329 COPZ2Q9P299 210 aa18.43■□□□□ 0.54
LIMD2-207ENST00000579329 SNAPC5O75971 98 aa18.42■□□□□ 0.54
LIMD2-207ENST00000579329 SERPINE2P07093 398 aa18.42■□□□□ 0.54
LIMD2-207ENST00000579329 ATP5G2Q06055 141 aa18.42■□□□□ 0.54
LIMD2-207ENST00000579329 MARCH1Q8TCQ1 289 aa18.42■□□□□ 0.54
LIMD2-207ENST00000579329 MRAPQ8TCY5 172 aa18.42■□□□□ 0.54
LIMD2-207ENST00000579329 TSC22D3Q99576 134 aa18.42■□□□□ 0.54
LIMD2-207ENST00000579329 QTRT1Q9BXR0 403 aaKnown RBP18.42■□□□□ 0.54
LIMD2-207ENST00000579329 H0Y980 276 aa18.41■□□□□ 0.54
LIMD2-207ENST00000579329 OR2J3O76001 311 aa18.41■□□□□ 0.54
LIMD2-207ENST00000579329 CTSDP07339 412 aaPredicted RBP18.41■□□□□ 0.54
LIMD2-207ENST00000579329 CTRB1P17538 263 aa18.41■□□□□ 0.54
LIMD2-207ENST00000579329 INSL3P51460 131 aa18.41■□□□□ 0.54
LIMD2-207ENST00000579329 EXOSC2Q13868 293 aaKnown RBP18.41■□□□□ 0.54
LIMD2-207ENST00000579329 CTRB2Q6GPI1 263 aa18.41■□□□□ 0.54
LIMD2-207ENST00000579329 OR1L8Q8NGR8 309 aa18.41■□□□□ 0.54
LIMD2-207ENST00000579329 PRRT1Q99946 306 aa18.41■□□□□ 0.54
LIMD2-207ENST00000579329 PEF1Q9UBV8 284 aaKnown RBP18.41■□□□□ 0.54
LIMD2-207ENST00000579329 PRNDQ9UKY0 176 aa18.41■□□□□ 0.54
LIMD2-207ENST00000579329 IGLC7A0M8Q6 106 aa18.4■□□□□ 0.54
LIMD2-207ENST00000579329 SURF2Q15527 256 aaPredicted RBP18.4■□□□□ 0.54
LIMD2-207ENST00000579329 C19orf35Q6ZS72 473 aa18.4■□□□□ 0.54
LIMD2-207ENST00000579329 MRGPRFQ96AM1 343 aa18.4■□□□□ 0.54
LIMD2-207ENST00000579329 SEC22AQ96IW7 307 aa18.4■□□□□ 0.54
LIMD2-207ENST00000579329 THAP7Q9BT49 309 aaPredicted RBP18.4■□□□□ 0.54
LIMD2-207ENST00000579329 C14orf166Q9Y224 244 aaKnown RBP18.4■□□□□ 0.54
LIMD2-207ENST00000579329 NSG2Q9Y328 171 aa18.4■□□□□ 0.54
LIMD2-207ENST00000579329 V9GYH0 126 aa18.4■□□□□ 0.54
LIMD2-207ENST00000579329 C3orf85A0A1B0GTC6 90 aa18.39■□□□□ 0.53
LIMD2-207ENST00000579329 TEX50A0A1B0GTY4 177 aa18.39■□□□□ 0.53
LIMD2-207ENST00000579329 IGKV1-39P01597 117 aa18.39■□□□□ 0.53
LIMD2-207ENST00000579329 IGKV1D-39P04432 117 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms