RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501		E7EUB6	86 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	CD3D	P04234	171 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	CRYGC	P07315	174 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ZP3	P21754	424 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	SLURP1	P55000	103 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ERVK-16	P61578	105 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	DGCR2	P98153	550 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	KLK9	Q2XQG4	91 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ZNF585B	Q52M93	769 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	PHLDA2	Q53GA4	152 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	RNASE12	Q5GAN4	147 aa	Known RBP	10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ZNF429	Q86V71	674 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	NECAP1	Q8NC96	275 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	DMBX1	Q8NFW5	382 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	SMIM4	Q8WVI0	70 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ZNF486	Q96H40	463 aa	Predicted RBP	10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	DIRAS2	Q96HU8	199 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	SRSF8	Q9BRL6	282 aa	Known RBP	10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	TMEM140	Q9NV12	185 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	KLK9	Q9UKQ9	250 aa		10.5	□□□□□ -0.73
CSNK1D-208	ENST00000578501	HMX3	A6NHT5	357 aa		10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	MARCH11	A6NNE9	402 aa		10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	RBMXL2	O75526	392 aa	Known RBP	10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	PTBP1	P26599	531 aa	Known RBP eCLIP	10.49	□□□□□ -0.73	6e-8	■■■■■ 32.4
CSNK1D-208	ENST00000578501	LPAR6	P43657	344 aa		10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	OR2B8P	P59922	312 aa		10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	RND3	P61587	244 aa		10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	RHOG	P84095	191 aa		10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ZNF45	Q02386	682 aa		10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	FAM209B	Q5JX69	171 aa		10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	TBC1D26	Q86UD7	250 aa		10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	FYTTD1	Q96QD9	318 aa	Known RBP	10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	SOST	Q9BQB4	213 aa		10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	C6orf62	Q9GZU0	229 aa	Predicted RBP	10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	AKIP1	Q9NQ31	210 aa		10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	PEF1	Q9UBV8	284 aa	Known RBP	10.49	□□□□□ -0.73
CSNK1D-208	ENST00000578501	TRAV3	A0A0B4J244	114 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	DPPA5	A6NC42	116 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	CGB1	A6NKQ9	187 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501		K7EIL1	84 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ZNF701	M0R085	212 aa	Predicted RBP	10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	DHFR	P00374	187 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	CTRB1	P17538	263 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	PSMB6	P28072	239 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ATP5G2	Q06055	141 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	IL18	Q14116	193 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	DEFB121	Q5J5C9	76 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	CTRB2	Q6GPI1	263 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	THOC7	Q6I9Y2	204 aa	Known RBP	10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	STEAP1B	Q6NZ63	245 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ACSM6	Q6P461	480 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	TERB2	Q8NHR7	220 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	MCFD2	Q8NI22	146 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	COMMD5	Q9GZQ3	224 aa		10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	RSL24D1	Q9UHA3	163 aa	Known RBP	10.48	□□□□□ -0.73
CSNK1D-208	ENST00000578501	TENM3	Q9P273	2699 aa		10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ANKRD34B	A5PLL1	514 aa		10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	GSTZ1	O43708	216 aa	Predicted RBP	10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	RAB3D	O95716	219 aa		10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	KRAS	P01116	189 aa		10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	PRH1	P02810	166 aa		10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	AREG	P15514	252 aa		10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	DCTN2	Q13561	401 aa	Known RBP	10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	KLF5	Q13887	457 aa	Predicted RBP	10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	MEF2D	Q14814	521 aa		10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	OR4D10	Q8NGI6	311 aa		10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ZFAND1	Q8TCF1	268 aa		10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	RBM38	Q9H0Z9	239 aa	Known RBP	10.47	□□□□□ -0.73
CSNK1D-208	ENST00000578501	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	IGLC7	A0M8Q6	106 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	FABP12	A6NFH5	140 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	SNAPC5	O75971	98 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	MYOD1	P15172	320 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	PGAM2	P15259	253 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	RPA2	P15927	270 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	HIST1H1B	P16401	226 aa	Known RBP	10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	TNFSF8	P32971	234 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	G6PC	P35575	357 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ECI1	P42126	302 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	PIGP	P57054	158 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	CD69	Q07108	199 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	C15orf32	Q32M92	178 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	OR1L8	Q8NGR8	309 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	FANCD2OS	Q96PS1	177 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	TSC22D3	Q99576	134 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	ELOVL1	Q9BW60	279 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	QTRT1	Q9BXR0	403 aa	Known RBP	10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	FKBP11	Q9NYL4	201 aa		10.46	□□□□□ -0.73
CSNK1D-208	ENST00000578501	TEX50	A0A1B0GTY4	177 aa		10.45	□□□□□ -0.74
CSNK1D-208	ENST00000578501	CCDC160	A6NGH7	325 aa		10.45	□□□□□ -0.74
CSNK1D-208	ENST00000578501		H0Y980	276 aa		10.45	□□□□□ -0.74
CSNK1D-208	ENST00000578501	SAP30	O75446	220 aa		10.45	□□□□□ -0.74
CSNK1D-208	ENST00000578501	OR2J3	O76001	311 aa		10.45	□□□□□ -0.74
CSNK1D-208	ENST00000578501	AKAIN1	P0CW23	69 aa		10.45	□□□□□ -0.74
CSNK1D-208	ENST00000578501	TRAPPC2	P0DI81	140 aa		10.45	□□□□□ -0.74
CSNK1D-208	ENST00000578501	TRAPPC2B	P0DI82	140 aa		10.45	□□□□□ -0.74
CSNK1D-208	ENST00000578501	DEFA5	Q01523	94 aa		10.45	□□□□□ -0.74
CSNK1D-208	ENST00000578501	EXOSC2	Q13868	293 aa	Known RBP	10.45	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms