RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 SULT1A1P50225 295 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 PSG5Q15238 335 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 SPINK9Q5DT21 86 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 SPANXN5Q5MJ07 72 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 ZNF767PQ75MW2 155 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 STOML3Q8TAV4 291 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 HIPK2Q9H2X6 1198 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 NBPF19A0A087WUL8 3843 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 CRYGBP07316 175 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 SNRNP70P08621 437 aaKnown RBP14.89□□□□□ -0.03
PRKCA-203ENST00000578063 BRS3P32247 399 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 PRCDQ00LT1 54 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 NHLH2Q02577 135 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 MMD2Q8IY49 270 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 EAF1Q96JC9 268 aaPredicted RBP14.89□□□□□ -0.03
PRKCA-203ENST00000578063 ZNF430Q9H8G1 570 aaPredicted RBP14.89□□□□□ -0.03
PRKCA-203ENST00000578063 ENY2Q9NPA8 101 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 CYTL1Q9NRR1 136 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 ITGB1BP2Q9UKP3 347 aa14.89□□□□□ -0.03
PRKCA-203ENST00000578063 STRAPQ9Y3F4 350 aaKnown RBP14.89□□□□□ -0.03
PRKCA-203ENST00000578063 IFNA7P01567 189 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 PAX6P26367 422 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 VDAC2P45880 294 aaPredicted RBP14.88□□□□□ -0.03
PRKCA-203ENST00000578063 EIF5AP63241 154 aaKnown RBP14.88□□□□□ -0.03
PRKCA-203ENST00000578063 RPP30P78346 268 aaKnown RBP14.88□□□□□ -0.03
PRKCA-203ENST00000578063 EBI3Q14213 229 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 HES1Q14469 280 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 MMDQ15546 238 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 RUSC1-AS1Q66K80 236 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 TMEM14EPQ6UXP3 125 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 ZNF680Q8NEM1 530 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 OR1L8Q8NGR8 309 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 ST8SIA2Q92186 375 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 SMIM3Q9BZL3 60 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 PLEKHA3Q9HB20 300 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 HEYLQ9NQ87 328 aaPredicted RBP14.88□□□□□ -0.03
PRKCA-203ENST00000578063 METTL1Q9UBP6 276 aaKnown RBP14.88□□□□□ -0.03
PRKCA-203ENST00000578063 SIGLEC9Q9Y336 463 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 VPS13CQ709C8 3753 aa14.88□□□□□ -0.03
PRKCA-203ENST00000578063 TEX50A0A1B0GTY4 177 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 NBR2O15453 112 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 CST7O76096 145 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 SCAF4O95104 1147 aaKnown RBP14.87□□□□□ -0.03
PRKCA-203ENST00000578063 IGHV4-38-2P0DP08 117 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 TPT1P13693 172 aaKnown RBP14.87□□□□□ -0.03
PRKCA-203ENST00000578063 CNTFRP26992 372 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 MAS1LP35410 378 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 TMEM267Q0VDI3 215 aaPredicted RBP14.87□□□□□ -0.03
PRKCA-203ENST00000578063 PRSS8Q16651 343 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 CLEC9AQ6UXN8 241 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 STPG2Q8N412 459 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 WFDC11Q8NEX6 87 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 NPBQ8NG41 125 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 TPSG1Q9NRR2 321 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 KIAA1456Q9P272 454 aa14.87□□□□□ -0.03
PRKCA-203ENST00000578063 IGHV3OR16-10A0A075B7F0 116 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 RRHO14718 337 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 JTBO76095 146 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 FAM106CPP0CH98 169 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 HBG1P69891 147 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 HBG2P69892 147 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 PPP1R27Q86WC6 154 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 THNSL2Q86YJ6 484 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 BSCL2Q96G97 398 aaPredicted RBP14.86□□□□□ -0.03
PRKCA-203ENST00000578063 OR4C12Q96R67 309 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 HINT2Q9BX68 163 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.86□□□□□ -0.033e-9■■■■□ 19.7
PRKCA-203ENST00000578063 NDUFA3O95167 84 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 CFDP00746 253 aaPredicted RBP14.86□□□□□ -0.03
PRKCA-203ENST00000578063 METTL15P1P0C7V9 234 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 MYOD1P15172 320 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 EXOSC2Q13868 293 aaKnown RBP14.86□□□□□ -0.03
PRKCA-203ENST00000578063 Q8N6K4 173 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 TMEM217Q8N7C4 229 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 OR1S2Q8NGQ3 325 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 OR5C1Q8NGR4 320 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 NDUFA4L2Q9NRX3 87 aa14.86□□□□□ -0.03
PRKCA-203ENST00000578063 BORCS7-ASMTA0A0B4J1R7 106 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 ACTL6BO94805 426 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 AVPP01185 164 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 TMEM11P17152 192 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 CD24P25063 80 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 DYNLT3P51808 116 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 F2RL1P55085 397 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 BPIFB3P59826 476 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 HNF4GQ14541 408 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 ZNF266Q14584 549 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 PLGLAQ15195 96 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 MRGPRG-AS1Q2M3A8 158 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 CYB5R2Q6BCY4 276 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 RPL7L1Q6DKI1 246 aaKnown RBP14.85□□□□□ -0.03
PRKCA-203ENST00000578063 BRD3OSQ6XYD6 125 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 PHYHIPLQ96FC7 376 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 FBXL15Q9H469 300 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 UBQLN2Q9UHD9 624 aa14.85□□□□□ -0.03
PRKCA-203ENST00000578063 A0A1W2PN81 502 aa14.84□□□□□ -0.03
PRKCA-203ENST00000578063 INS-IGF2F8WCM5 200 aa14.84□□□□□ -0.03
PRKCA-203ENST00000578063 OPN1MWP04001 364 aa14.84□□□□□ -0.03
PRKCA-203ENST00000578063 OPN1MW2P0DN77 364 aa14.84□□□□□ -0.03
PRKCA-203ENST00000578063 OPN1MW3P0DN78 364 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms