RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 HMX3A6NHT5 357 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 DISC1C4P0D8 188 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 IGHV3-11P01762 117 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 MYOD1P15172 320 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 PI3P19957 117 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 PPP5CP53041 499 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 PIGPP57054 158 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 ERVK-16P61578 105 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 ZNF616Q08AN1 781 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 FOXB2Q5VYV0 432 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 ZFAND1Q8TCF1 268 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 COA4Q9NYJ1 87 aa14.94□□□□□ -0.02
SS18-208ENST00000577751 A0A0G2JLM5 398 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 RBMXL2O75526 392 aaKnown RBP14.93□□□□□ -0.02
SS18-208ENST00000577751 KRASP01116 189 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 OR8U8P0C7N1 319 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 RPA2P15927 270 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 ETV6P41212 452 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 ECI1P42126 302 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 OR2B8PP59922 312 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 SLC25A42Q86VD7 318 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 OR13C8Q8NGS7 320 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 MARCH1Q8TCQ1 289 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 TRIM63Q969Q1 353 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 MCRIP2Q9BUT9 160 aaKnown RBP14.93□□□□□ -0.02
SS18-208ENST00000577751 SLC2A8Q9NY64 477 aa14.93□□□□□ -0.02
SS18-208ENST00000577751 TRBV9A0A0B4J1U6 114 aa14.92□□□□□ -0.02
SS18-208ENST00000577751 NPIPB5A8MRT5 1133 aa14.92□□□□□ -0.02
SS18-208ENST00000577751 IGKV1-39P01597 117 aa14.92□□□□□ -0.02
SS18-208ENST00000577751 IGKV1D-39P04432 117 aa14.92□□□□□ -0.02
SS18-208ENST00000577751 HSPB1P04792 205 aaKnown RBP14.92□□□□□ -0.02
SS18-208ENST00000577751 CRYGCP07315 174 aa14.92□□□□□ -0.02
SS18-208ENST00000577751 CTSDP07339 412 aaPredicted RBP14.92□□□□□ -0.02
SS18-208ENST00000577751 G6PCP35575 357 aa14.92□□□□□ -0.02
SS18-208ENST00000577751 ZNF45Q02386 682 aa14.92□□□□□ -0.02
SS18-208ENST00000577751 SURF2Q15527 256 aaPredicted RBP14.92□□□□□ -0.02
SS18-208ENST00000577751 OR6Q1Q8NGQ2 317 aa14.92□□□□□ -0.02
SS18-208ENST00000577751 SEC22AQ96IW7 307 aa14.92□□□□□ -0.02
SS18-208ENST00000577751 USMG5Q96IX5 58 aa14.92□□□□□ -0.02
SS18-208ENST00000577751 FYTTD1Q96QD9 318 aaKnown RBP14.92□□□□□ -0.02
SS18-208ENST00000577751 ZNF257Q9Y2Q1 563 aa14.92□□□□□ -0.02
SS18-208ENST00000577751 IGHV4OR15-8A0A075B7B6 117 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 A0A087WW49 117 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 C13orf42A0A1B0GVH6 325 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 LINC01619G3V211 115 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 H0Y980 276 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 WIPF1O43516 503 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 RAB25P57735 213 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 KLK9Q2XQG4 91 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 PYDC2Q56P42 97 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 Q8N402 240 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 OR51S1Q8NGJ8 323 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 DPF1Q92782 380 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 TP53RKQ96S44 253 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 PRRT1Q99946 306 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 SRSF8Q9BRL6 282 aaKnown RBP14.91□□□□□ -0.02
SS18-208ENST00000577751 RTBDNQ9BSG5 229 aaPredicted RBP14.91□□□□□ -0.02
SS18-208ENST00000577751 GPR61Q9BZJ8 451 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 COMMD5Q9GZQ3 224 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 KLK9Q9UKQ9 250 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 GPR132Q9UNW8 380 aa14.91□□□□□ -0.02
SS18-208ENST00000577751 C3orf85A0A1B0GTC6 90 aa14.9□□□□□ -0.02
SS18-208ENST00000577751 PRH1P02810 166 aa14.9□□□□□ -0.02
SS18-208ENST00000577751 AREGP15514 252 aa14.9□□□□□ -0.02
SS18-208ENST00000577751 CTRB1P17538 263 aa14.9□□□□□ -0.02
SS18-208ENST00000577751 KLF9Q13886 244 aaPredicted RBP14.9□□□□□ -0.02
SS18-208ENST00000577751 CTRB2Q6GPI1 263 aa14.9□□□□□ -0.02
SS18-208ENST00000577751 ZNF343Q6P1L6 599 aa14.9□□□□□ -0.02
SS18-208ENST00000577751 CCDC71LQ8N9Z2 235 aa14.9□□□□□ -0.02
SS18-208ENST00000577751 AKIP1Q9NQ31 210 aa14.9□□□□□ -0.02
SS18-208ENST00000577751 COPZ2Q9P299 210 aa14.9□□□□□ -0.02
SS18-208ENST00000577751 TEX50A0A1B0GTY4 177 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 FAM223BA6NKX1 122 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 PSMB6P28072 239 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 RHOGP84095 191 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 DEFA5Q01523 94 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 EGFEM1PQ0D2K5 195 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 SPANXN2Q5MJ10 180 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 FAM223AQ8IWN6 122 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 GDPD1Q8N9F7 314 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 DCUN1D4Q92564 292 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 FANCD2OSQ96PS1 177 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 C5orf66Q9H5L9 145 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 SCP2D1Q9UJQ7 156 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 NSG2Q9Y328 171 aa14.89□□□□□ -0.03
SS18-208ENST00000577751 IGLC7A0M8Q6 106 aa14.88□□□□□ -0.03
SS18-208ENST00000577751 B3GALNT1O75752 331 aa14.88□□□□□ -0.03
SS18-208ENST00000577751 SNAPC5O75971 98 aa14.88□□□□□ -0.03
SS18-208ENST00000577751 SERPINE2P07093 398 aa14.88□□□□□ -0.03
SS18-208ENST00000577751 SLURP1P55000 103 aa14.88□□□□□ -0.03
SS18-208ENST00000577751 THOC7Q6I9Y2 204 aaKnown RBP14.88□□□□□ -0.03
SS18-208ENST00000577751 NECAP1Q8NC96 275 aa14.88□□□□□ -0.03
SS18-208ENST00000577751 DLX4Q92988 240 aaPredicted RBP14.88□□□□□ -0.03
SS18-208ENST00000577751 TSC22D3Q99576 134 aa14.88□□□□□ -0.03
SS18-208ENST00000577751 QTRT1Q9BXR0 403 aaKnown RBP14.88□□□□□ -0.03
SS18-208ENST00000577751 RANGRFQ9HD47 186 aaPredicted RBP14.88□□□□□ -0.03
SS18-208ENST00000577751 NDUFA4L2Q9NRX3 87 aa14.88□□□□□ -0.03
SS18-208ENST00000577751 C14orf166Q9Y224 244 aaKnown RBP14.88□□□□□ -0.03
SS18-208ENST00000577751 UCP1P25874 307 aa14.87□□□□□ -0.03
SS18-208ENST00000577751 PDLIM3Q53GG5 364 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms