RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 TCF21O43680 179 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 CA2P00918 260 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 LGALS7P47929 136 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 PPOXP50336 477 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 RPL23P62829 140 aaKnown RBP9.2□□□□□ -0.94
RNF43-203ENST00000577716 SPATA45Q537H7 98 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 NPIPB3Q92617 1050 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 SSBP3Q9BWW4 388 aaPredicted RBP9.2□□□□□ -0.94
RNF43-203ENST00000577716 CLDN16Q9Y5I7 305 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 SLC17A3O00476 420 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 CD55P08174 381 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 IL6RP08887 468 aaPredicted RBP9.2□□□□□ -0.94
RNF43-203ENST00000577716 FTH1P19P0C7X4 201 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 C1RLQ9NZP8 487 aa9.2□□□□□ -0.94
RNF43-203ENST00000577716 IGKV1-27A0A075B6S5 117 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.19□□□□□ -0.94
RNF43-203ENST00000577716 TRAV24A0A0B4J272 114 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 IFITM10A6NMD0 228 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 CELA3BP08861 270 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 SSX8Q7RTT4 187 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 GTF3AQ92664 365 aaKnown RBP9.19□□□□□ -0.94
RNF43-203ENST00000577716 FAM131CQ96AQ9 280 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 SNRNP40Q96DI7 357 aaKnown RBP9.19□□□□□ -0.94
RNF43-203ENST00000577716 RBM14Q96PK6 669 aaKnown RBP9.19□□□□□ -0.94
RNF43-203ENST00000577716 SCNM1Q9BWG6 230 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 LNP1A1A4G5 178 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HIST1H2BKO60814 126 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HIST1H2BJP06899 126 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HIST1H2BOP23527 126 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HIST1H2BBP33778 126 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 FOXG1P55316 489 aaPredicted RBP9.19□□□□□ -0.94
RNF43-203ENST00000577716 HIST1H2BDP58876 126 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HIST1H2BCP62807 126 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HIST2H2BEQ16778 126 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.19□□□□□ -0.94
RNF43-203ENST00000577716 FDCSPQ8NFU4 85 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HIST1H2BHQ93079 126 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HIST1H2BNQ99877 126 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HIST1H2BMQ99879 126 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 H3BTX0 84 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HINT1P49773 126 aaPredicted RBP9.19□□□□□ -0.94
RNF43-203ENST00000577716 SRSF4Q08170 494 aaKnown RBP9.19□□□□□ -0.94
RNF43-203ENST00000577716 ZNF146Q15072 292 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 KRTCAP3Q53RY4 240 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 PCSK4Q6UW60 755 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 TMEM116Q8NCL8 245 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 OR51G1Q8NGK1 321 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 PNRC2Q9NPJ4 139 aaKnown RBP9.19□□□□□ -0.94
RNF43-203ENST00000577716 UQCR10Q9UDW1 63 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 SOD3P08294 240 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 LHX2P50458 406 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 FAM201AQ5SY85 155 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 HEPN1Q6WQI6 88 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 BPIFA4PQ86YQ2 179 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 DIRC2Q96SL1 478 aa9.19□□□□□ -0.94
RNF43-203ENST00000577716 OR2T8A6NH00 312 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 F5H697 171 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 UBE2CO00762 179 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 CGAP01215 116 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 CLDN18P56856 261 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 PMCHL1Q16048 86 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 TMEM177Q53S58 311 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 OR4C13Q8NGP0 309 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 LOXL4Q96JB6 756 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 IMMP2LQ96T52 175 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 USF3Q68DE3 2245 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 SCO2A0A1W2PP80 73 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 LEPROTL1O95214 131 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 REG1AP05451 166 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 RELBQ01201 579 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 C19orf24Q9BVV8 132 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 MRPS18CQ9Y3D5 142 aaKnown RBP9.18□□□□□ -0.94
RNF43-203ENST00000577716 GLRXP35754 106 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 TMEM97Q5BJF2 176 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 RFNGQ9Y644 331 aa9.18□□□□□ -0.94
RNF43-203ENST00000577716 C5orf52A6NGY3 159 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 IGFBP2P18065 325 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 RPL24P83731 157 aaKnown RBP9.17□□□□□ -0.94
RNF43-203ENST00000577716 C21orf62-AS1Q17RA5 79 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 ATOH7Q8N100 152 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 HILPDAQ9Y5L2 63 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 AUP1Q9Y679 476 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 LOC389332A0A1B0GUA5 103 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 C1QTNF9BB2RNN3 333 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 M0QZ24 198 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 AMY1AP04745 511 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 CA7P43166 264 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 ZNF738Q8NE65 137 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 WDYHV1Q96HA8 205 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 PGLYRP4Q96LB8 373 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 IGKV3-7A0A075B6H7 116 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 J3KRW8 73 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 GOSR1O95249 250 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 NAPSAO96009 420 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 ADCYAP1P18509 176 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 IGHV1-2P23083 117 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 MAS1LP35410 378 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 RAMP3O60896 148 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 TCTAP57738 103 aa9.17□□□□□ -0.94
RNF43-203ENST00000577716 RPL30P62888 115 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms