RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	IGKV1-16	P04430	117 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	MIR17HG	Q75NE6	70 aa		12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	RNASE7	Q9H1E1	156 aa	Known RBP	12.25	□□□□□ -0.45
PRPF8-216	ENST00000577001	IGHV2OR16-5	A0A0B4J2B6	119 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001		A0A1B0GW64	132 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	PMS2P5	A8MQ11	134 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	RNF212B	A8MTL3	300 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	ZNF90	Q03938	601 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	MRPL54	Q6P161	138 aa	Known RBP	12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	TREML4	Q6UXN2	200 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	CYP2G1P	Q6ZSU1	146 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	GMPPA	Q96IJ6	420 aa	Predicted RBP	12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	UHRF2	Q96PU4	802 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	CUBN	O60494	3623 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	EREG	O14944	169 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	ERVK-16	P61578	105 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	SMIM21	Q3B7S5	101 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	ATOH7	Q8N100	152 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	MGST2	Q99735	147 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	CXXC4	Q9H2H0	198 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	ZDHHC11	Q9H8X9	412 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001		A6NNC1	897 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001		F6UZH7	168 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	DUT	P33316	252 aa	Known RBP	12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	DIAPH2-AS1	Q14236	149 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	TGIF2LX	Q8IUE1	241 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	GCSAM	Q8N6F7	178 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	H1FX	Q92522	213 aa	Known RBP	12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	AGMAT	Q9BSE5	352 aa		12.24	□□□□□ -0.45
PRPF8-216	ENST00000577001	TRAV34	A0A0B4J273	112 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001		M0R296	226 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	TMPRSS2	O15393	492 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	KITLG	P21583	273 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	CD24	P25063	80 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	TIMP3	P35625	211 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	ACOT6	Q3I5F7	207 aa	Predicted RBP	12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	TMEM170A	Q8WVE7	144 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	PAM16	Q9Y3D7	125 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	HRAS	P01112	189 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	CCL3L1	P16619	93 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	CRYBB3	P26998	211 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	CASP6	P55212	293 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	RPL31	P62899	125 aa	Known RBP	12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	PSG5	Q15238	335 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	PSMG3	Q9BT73	122 aa	Predicted RBP	12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	DDA1	Q9BW61	102 aa		12.23	□□□□□ -0.45
PRPF8-216	ENST00000577001	MDFIC2	A0A1B0GVS7	189 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	IQCF6	A8MYZ5	107 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	CA2	P00918	260 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	ADM	P35318	185 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	MORN2	Q502X0	79 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	SP5	Q6BEB4	398 aa	Predicted RBP	12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001		Q6ZT83	130 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	LINC01551	Q86U37	167 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	HIPK2	Q9H2X6	1198 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	TCF19	Q9Y242	345 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	PITPNC1	Q9UKF7	332 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	TP53TG5	Q9Y2B4	290 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	C21orf140	B9A014	251 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	CYC1	P08574	325 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	PNRC1	Q12796	327 aa	Predicted RBP	12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	TEX38	Q6PEX7	206 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	MOB1B	Q7L9L4	216 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	OR9G1	Q8NH87	305 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	MANBAL	Q9NQG1	85 aa		12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.22	□□□□□ -0.45
PRPF8-216	ENST00000577001	C19orf67	A6NJJ6	358 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	ERVFC1-1	P60608	527 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	TOMM20L	Q6UXN7	152 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	WFDC8	Q8IUA0	241 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	TMEM183A	Q8IXX5	376 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001		Q8IYB0	196 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	OR8I2	Q8N0Y5	310 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	SRD5A3	Q9H8P0	318 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	SAA2-SAA4	A0A096LPE2	208 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	SAA2	P0DJI9	122 aa	Predicted RBP	12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	SUMO1	P63165	101 aa	Known RBP	12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	SSBP2	P81877	361 aa	Predicted RBP	12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	ARSJ	Q5FYB0	599 aa	Predicted RBP	12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	CT45A1	Q5HYN5	189 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	SLC35E4	Q6ICL7	350 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	CT45A3	Q8NHU0	189 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	ZPBP	Q9BS86	351 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	ZNF71	Q9NQZ8	489 aa	Predicted RBP	12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	PROCR	Q9UNN8	238 aa		12.21	□□□□□ -0.45
PRPF8-216	ENST00000577001	TRAV1-1	A0A0B4J248	108 aa		12.21	□□□□□ -0.46
PRPF8-216	ENST00000577001	NTF3	P20783	257 aa		12.21	□□□□□ -0.46
PRPF8-216	ENST00000577001	NRN1L	Q496H8	165 aa		12.21	□□□□□ -0.46
PRPF8-216	ENST00000577001	STPG3	Q8N7X2	389 aa		12.21	□□□□□ -0.46
PRPF8-216	ENST00000577001	OR2T6	Q8NHC8	308 aa		12.21	□□□□□ -0.46
PRPF8-216	ENST00000577001	ENY2	Q9NPA8	101 aa		12.21	□□□□□ -0.46
PRPF8-216	ENST00000577001	PMCH	P20382	165 aa		12.2	□□□□□ -0.46
PRPF8-216	ENST00000577001	HOXA6	P31267	233 aa		12.2	□□□□□ -0.46
PRPF8-216	ENST00000577001	SPCS3	P61009	180 aa		12.2	□□□□□ -0.46
PRPF8-216	ENST00000577001	PEAR1	Q5VY43	1037 aa	Predicted RBP	12.2	□□□□□ -0.46
PRPF8-216	ENST00000577001	MORN5	Q5VZ52	161 aa		12.2	□□□□□ -0.46
PRPF8-216	ENST00000577001	VN1R17P	Q8TDU5	208 aa		12.2	□□□□□ -0.46
PRPF8-216	ENST00000577001	CCL17	Q92583	94 aa		12.2	□□□□□ -0.46
PRPF8-216	ENST00000577001	SMDT1	Q9H4I9	107 aa		12.2	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms