RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 LINC00299Q6ZSB3 139 aa11.86□□□□□ -0.51
LITAF-217ENST00000575426 H2BFWTQ7Z2G1 175 aa11.86□□□□□ -0.51
LITAF-217ENST00000575426 CADM3Q8N126 398 aa11.86□□□□□ -0.51
LITAF-217ENST00000575426 CASTOR1Q8WTX7 329 aa11.86□□□□□ -0.51
LITAF-217ENST00000575426 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
LITAF-217ENST00000575426 TSC22D3Q99576 134 aa11.86□□□□□ -0.51
LITAF-217ENST00000575426 RTBDNQ9BSG5 229 aaPredicted RBP11.86□□□□□ -0.51
LITAF-217ENST00000575426 NAP1L6A6NFF2 107 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 CENPXA8MT69 81 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 CD33P20138 364 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 MYCNOSP40205 109 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 BAK1Q16611 211 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 C18orf65Q6ZTR6 163 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 SGPP2Q8IWX5 399 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 MYOZ3Q8TDC0 251 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 C4orf3Q8WVX3 66 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 TP53RKQ96S44 253 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 C5orf66Q9H5L9 145 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 FKBP11Q9NYL4 201 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 KCNIP3Q9Y2W7 256 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 VWFP04275 2813 aa11.85□□□□□ -0.51
LITAF-217ENST00000575426 TRAV3A0A0B4J244 114 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 A0A0G2JLM5 398 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 C13orf42A0A1B0GVH6 325 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 HMX3A6NHT5 357 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 CCL24O00175 119 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 IL6RP08887 468 aaPredicted RBP11.84□□□□□ -0.51
LITAF-217ENST00000575426 FGF2P09038 288 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 DHODHQ02127 395 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 SP6Q3SY56 376 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 ASPHD1Q5U4P2 390 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 OR4A16Q8NH70 328 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 RNASE11Q8TAA1 199 aaKnown RBP11.84□□□□□ -0.51
LITAF-217ENST00000575426 S100ZQ8WXG8 99 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 SLC25A21Q9BQT8 299 aaPredicted RBP11.84□□□□□ -0.51
LITAF-217ENST00000575426 NAA60Q9H7X0 242 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 PTTG2Q9NZH5 202 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 PRNDQ9UKY0 176 aa11.84□□□□□ -0.51
LITAF-217ENST00000575426 LINC00854A0A1B0GVQ3 168 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 RBMXL2O75526 392 aaKnown RBP11.83□□□□□ -0.52
LITAF-217ENST00000575426 DHFRP00374 187 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 OR5AC1P0C628 307 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 AKR1C4P17516 323 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 AKR1C2P52895 323 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 KIAA0141Q14154 515 aaPredicted RBP11.83□□□□□ -0.52
LITAF-217ENST00000575426 THOC7Q6I9Y2 204 aaKnown RBP11.83□□□□□ -0.52
LITAF-217ENST00000575426 TTC9CQ8N5M4 171 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 OR1L8Q8NGR8 309 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 DPF1Q92782 380 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 SEC22AQ96IW7 307 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 OR5B12Q96R08 314 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 GNB4Q9HAV0 340 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 ZNF257Q9Y2Q1 563 aa11.83□□□□□ -0.52
LITAF-217ENST00000575426 CRYM-AS1A6NIL9 109 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 TEX22C9J3V5 150 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 BRI3O95415 125 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 IGKV1-39P01597 117 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 IGKV1D-39P04432 117 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 TRAPPC2P0DI81 140 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 TRAPPC2BP0DI82 140 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 IL7P13232 177 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 MYOD1P15172 320 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 UCP1P25874 307 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 RAB25P57735 213 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 OR2B8PP59922 312 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 RUNX1Q01196 453 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 ADAD2Q8NCV1 583 aaKnown RBP11.82□□□□□ -0.52
LITAF-217ENST00000575426 OR11H1Q8NG94 326 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 RRNAD1Q96FB5 475 aaKnown RBP11.82□□□□□ -0.52
LITAF-217ENST00000575426 RAX2Q96IS3 184 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 USMG5Q96IX5 58 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 DUX3Q96PT4 197 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 SDHCQ99643 169 aaPredicted RBP11.82□□□□□ -0.52
LITAF-217ENST00000575426 C7orf50Q9BRJ6 194 aaKnown RBP11.82□□□□□ -0.52
LITAF-217ENST00000575426 HINT2Q9BX68 163 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 QTRT1Q9BXR0 403 aaKnown RBP11.82□□□□□ -0.52
LITAF-217ENST00000575426 TMEM222Q9H0R3 208 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 NSG2Q9Y328 171 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 OR51B2Q9Y5P1 312 aa11.82□□□□□ -0.52
LITAF-217ENST00000575426 TEX50A0A1B0GTY4 177 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 NPIPB5A8MRT5 1133 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 E7EUB6 86 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 I3L521 148 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 CYB5BO43169 146 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 IGHV3-11P01762 117 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 LGALS1P09382 135 aaKnown RBP11.81□□□□□ -0.52
LITAF-217ENST00000575426 ANXA3P12429 323 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 DEFA4P12838 97 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 MECP2P51608 486 aaKnown RBP11.81□□□□□ -0.52
LITAF-217ENST00000575426 DEFB136Q30KP8 78 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 HSD17B13Q7Z5P4 300 aaPredicted RBP11.81□□□□□ -0.52
LITAF-217ENST00000575426 TMED4Q7Z7H5 227 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 MRPL41Q8IXM3 137 aaKnown RBP11.81□□□□□ -0.52
LITAF-217ENST00000575426 OR1N2Q8NGR9 330 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 TMEM56Q96MV1 263 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 SRSF8Q9BRL6 282 aaKnown RBP11.81□□□□□ -0.52
LITAF-217ENST00000575426 AKIP1Q9NQ31 210 aa11.81□□□□□ -0.52
LITAF-217ENST00000575426 CDS2O95674 445 aa11.8□□□□□ -0.52
LITAF-217ENST00000575426 OR8U8P0C7N1 319 aa11.8□□□□□ -0.52
LITAF-217ENST00000575426 PSMB6P28072 239 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms