RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 RPL27AP46776 148 aaKnown RBP6.64□□□□□ -1.35
SMG6-216ENST00000575176 RPL8P62917 257 aaKnown RBP6.64□□□□□ -1.35
SMG6-216ENST00000575176 SSBP1Q04837 148 aaKnown RBP6.64□□□□□ -1.35
SMG6-216ENST00000575176 WT1-ASQ06250 92 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 TMEM267Q0VDI3 215 aaPredicted RBP6.64□□□□□ -1.35
SMG6-216ENST00000575176 CATR1Q13166 79 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 CBX3Q13185 183 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 PHLDA2Q53GA4 152 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 ADAMTSL5Q6ZMM2 481 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 TBC1D26Q86UD7 250 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 CCDC190Q86UF4 302 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 OR4C16Q8NGL9 310 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 OR1N2Q8NGR9 330 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 OR6F1Q8NGZ6 308 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 OR4A5Q8NH83 315 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 ABHD5Q8WTS1 349 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 DGCR14Q96DF8 476 aaKnown RBP6.64□□□□□ -1.35
SMG6-216ENST00000575176 TMEM68Q96MH6 324 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 TP53RKQ96S44 253 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 THAP7Q9BT49 309 aaPredicted RBP6.64□□□□□ -1.35
SMG6-216ENST00000575176 SLC2A8Q9NY64 477 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 DYNC2H1Q8NCM8 4307 aaKnown RBP6.64□□□□□ -1.35
SMG6-216ENST00000575176 SMIM31A0A1B0GVY4 71 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 LINC01619G3V211 115 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 CNIH1O95406 144 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 HRASP01112 189 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 EDN2P20800 178 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 MAS1LP35410 378 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 PPP5CP53041 499 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 MRPS10P82664 201 aaKnown RBP6.63□□□□□ -1.35
SMG6-216ENST00000575176 RHOGP84095 191 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 KLF9Q13886 244 aaPredicted RBP6.63□□□□□ -1.35
SMG6-216ENST00000575176 RNASE10Q5GAN6 216 aaKnown RBP6.63□□□□□ -1.35
SMG6-216ENST00000575176 STEAP1BQ6NZ63 245 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 ACSM6Q6P461 480 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 TMEM65Q6PI78 240 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 REC114Q7Z4M0 266 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 SLC38A6Q8IZM9 456 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 LHFPL5Q8TAF8 219 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 VSTM2AQ8TAG5 236 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 TMEM230Q96A57 120 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 SDHCQ99643 169 aaPredicted RBP6.63□□□□□ -1.35
SMG6-216ENST00000575176 LYSTQ99698 3801 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 RTBDNQ9BSG5 229 aaPredicted RBP6.63□□□□□ -1.35
SMG6-216ENST00000575176 C5orf66Q9H5L9 145 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 NDUFA4L2Q9NRX3 87 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 TMEM14BQ9NUH8 114 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 ZNF257Q9Y2Q1 563 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 LSM4Q9Y4Z0 139 aaKnown RBP6.63□□□□□ -1.35
SMG6-216ENST00000575176 RYR3Q15413 4870 aa6.63□□□□□ -1.35
SMG6-216ENST00000575176 MFSD2BA6NFX1 497 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 FAM223BA6NKX1 122 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 C15orf61A6NNL5 157 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 H0Y980 276 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 RGS5O15539 181 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 CREBL2O60519 120 aaPredicted RBP6.62□□□□□ -1.35
SMG6-216ENST00000575176 HSPB1P04792 205 aaKnown RBP6.62□□□□□ -1.35
SMG6-216ENST00000575176 REG1AP05451 166 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 RPA2P15927 270 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 PSMB6P28072 239 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 G6PCP35575 357 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 LPAR6P43657 344 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 TAS2R19P59542 299 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 EXOSC2Q13868 293 aaKnown RBP6.62□□□□□ -1.35
SMG6-216ENST00000575176 KLF5Q13887 457 aaPredicted RBP6.62□□□□□ -1.35
SMG6-216ENST00000575176 IZUMO4Q1ZYL8 232 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 AARDQ4LEZ3 155 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 HAPLN4Q86UW8 402 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 FAM223AQ8IWN6 122 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 OR10W1Q8NGF6 305 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 MCFD2Q8NI22 146 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 MARCH1Q8TCQ1 289 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 CD300LFQ8TDQ1 290 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 ZNF486Q96H40 463 aaPredicted RBP6.62□□□□□ -1.35
SMG6-216ENST00000575176 DIRAS2Q96HU8 199 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 FYTTD1Q96QD9 318 aaKnown RBP6.62□□□□□ -1.35
SMG6-216ENST00000575176 SPIN2AQ99865 258 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 SPIN2BQ9BPZ2 258 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 DCUN1D5Q9BTE7 237 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 C6orf62Q9GZU0 229 aaPredicted RBP6.62□□□□□ -1.35
SMG6-216ENST00000575176 RSL24D1Q9UHA3 163 aaKnown RBP6.62□□□□□ -1.35
SMG6-216ENST00000575176 NSG2Q9Y328 171 aa6.62□□□□□ -1.35
SMG6-216ENST00000575176 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.61□□□□□ -1.35
SMG6-216ENST00000575176 TEX50A0A1B0GTY4 177 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 SEC14L6B5MCN3 397 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 OVOL1O14753 267 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 MPPED1O15442 326 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 OR2J3O76001 311 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 NDUFB8O95169 186 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 RAB3DO95716 219 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 IGLV1-51P01701 117 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 UCP1P25874 307 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 ETV6P41212 452 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 MECP2P51608 486 aaKnown RBP6.61□□□□□ -1.35
SMG6-216ENST00000575176 SUPT4H1P63272 117 aaKnown RBP6.61□□□□□ -1.35
SMG6-216ENST00000575176 IL18Q14116 193 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 C15orf32Q32M92 178 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 C9orf66Q5T8R8 295 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 PVRIGQ6DKI7 326 aa6.61□□□□□ -1.35
SMG6-216ENST00000575176 NECAP1Q8NC96 275 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms