RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 YRDCQ86U90 279 aaKnown RBP8.03□□□□□ -1.12
CCDC40-212ENST00000574799 NHLRC2Q8NBF2 726 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 ZNF391Q9UJN7 358 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 A0A0G2JMM0 328 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 A0A1W2PPB8 328 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 KIR3DP1A8MWS1 328 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 YPEL1O60688 119 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 NTF4P34130 210 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 ERVK-16P61578 105 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 COX19Q49B96 90 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 TMEM14EPQ6UXP3 125 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 DRAM1Q8N682 238 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 CPT1CQ8TCG5 803 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 SPACA9Q96E40 222 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-212ENST00000574799 YPEL2Q96QA6 119 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 TRIB1Q96RU8 372 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 GNB1LQ9BYB4 327 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 AHCTF1Q8WYP5 2266 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 CNOT1A5YKK6 2376 aaKnown RBP8.03□□□□□ -1.12
CCDC40-212ENST00000574799 MUC21A0A0G2JKD1 596 aa8.02□□□□□ -1.12
CCDC40-212ENST00000574799 MUC21A0A140T8X8 626 aa8.02□□□□□ -1.12
CCDC40-212ENST00000574799 OR5B21A6NL26 309 aa8.02□□□□□ -1.12
CCDC40-212ENST00000574799 FAM90A26D6RGX4 464 aa8.02□□□□□ -1.12
CCDC40-212ENST00000574799 IGKV1-39P01597 117 aa8.02□□□□□ -1.12
CCDC40-212ENST00000574799 IGKV1D-39P04432 117 aa8.02□□□□□ -1.12
CCDC40-212ENST00000574799 LINC00869P0C866 280 aa8.02□□□□□ -1.12
CCDC40-212ENST00000574799 RHOBP62745 196 aa8.02□□□□□ -1.12
CCDC40-212ENST00000574799 MUC21Q5SSG8 566 aa8.02□□□□□ -1.12
CCDC40-212ENST00000574799 TRAT1Q6PIZ9 186 aa8.02□□□□□ -1.12
CCDC40-212ENST00000574799 CLEC5AQ9NY25 188 aa8.02□□□□□ -1.12
CCDC40-212ENST00000574799 hCG_38984A0A1B0GV85 526 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 FBLL1A6NHQ2 334 aaKnown RBP8.02□□□□□ -1.13
CCDC40-212ENST00000574799 LRRC30A6NM36 301 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 CXCL13O43927 109 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 GNG7O60262 68 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 TOMM40O96008 361 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 CA1P00915 261 aaPredicted RBP8.02□□□□□ -1.13
CCDC40-212ENST00000574799 AMY1AP04745 511 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 IGLL1P15814 213 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 LGALS4P56470 323 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 TCTAP57738 103 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 RAC1P63000 192 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 SRYQ05066 204 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 IL11RAQ14626 422 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 IBA57Q5T440 356 aaKnown RBP8.02□□□□□ -1.13
CCDC40-212ENST00000574799 Q6ZPA2 131 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 TMEM251Q8N6I4 163 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 OR8B3Q8NGG8 313 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 EAF1Q96JC9 268 aaPredicted RBP8.02□□□□□ -1.13
CCDC40-212ENST00000574799 OR2H1Q9GZK4 316 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 TMEM191AQ9H0A3 160 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 CUL9Q8IWT3 2517 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 IGHV2-26A0A0B4J1V2 119 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 RAMP3O60896 148 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 PPBPP02775 128 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 CFIP05156 583 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 ACP1P24666 158 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 GPR6P46095 362 aaPredicted RBP8.02□□□□□ -1.13
CCDC40-212ENST00000574799 SP5Q6BEB4 398 aaPredicted RBP8.02□□□□□ -1.13
CCDC40-212ENST00000574799 SSX8Q7RTT4 187 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 ZNF295-AS1Q8N0V1 137 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 Q8NFD4 153 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 TSKUQ8WUA8 353 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 TXNDC17Q9BRA2 123 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 TMEM38BQ9NVV0 291 aa8.02□□□□□ -1.13
CCDC40-212ENST00000574799 PEF1Q9UBV8 284 aaKnown RBP8.02□□□□□ -1.13
CCDC40-212ENST00000574799 TRBV20OR9-2A0A075B6H5 130 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 TRAV9-1A0A075B6T8 112 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 FKBP2P26885 142 aaKnown RBP8.01□□□□□ -1.13
CCDC40-212ENST00000574799 OR10J3Q5JRS4 329 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 PLA2G2CQ5R387 149 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 C10orf128Q5T292 105 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 DEFB108AA8MXU0 73 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 SYNGR3O43761 229 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 ZIC3O60481 467 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 CCL3P10147 92 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 GCHFRP30047 84 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 TNXAQ16473 311 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 LPAL2Q16609 132 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 C20orf204Q6ZNR8 217 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 RFESDQ8TAC1 157 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 NABP1Q96AH0 204 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 NAA38Q9BRA0 125 aaKnown RBP8.01□□□□□ -1.13
CCDC40-212ENST00000574799 TMEM70Q9BUB7 260 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 FNDC4Q9H6D8 234 aaPredicted RBP8.01□□□□□ -1.13
CCDC40-212ENST00000574799 GJE1A6NN92 205 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 PPIAL4DF5H284 164 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 CDX4O14627 284 aaPredicted RBP8.01□□□□□ -1.13
CCDC40-212ENST00000574799 IGLV3-1P01715 115 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 NPY1RP25929 384 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 LINC00310P59036 64 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 B3GALT5-AS1P59052 145 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 LRRC10Q5BKY1 277 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 SAP30LQ9HAJ7 183 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 DLL3Q9NYJ7 618 aa8.01□□□□□ -1.13
CCDC40-212ENST00000574799 USF3Q68DE3 2245 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 IGHV3-43A0A0B4J1X8 118 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 hDV102S1A0JD36 115 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 IGLC7A0M8Q6 106 aa8□□□□□ -1.13
CCDC40-212ENST00000574799 FAM90A10PA6NDY2 464 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms