RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 GALMQ96C23 342 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 IGHV1-45A0A0A0MS14 117 aa11.96□□□□□ -0.49
SMG6-215ENST00000574501 IGHV3-43A0A0B4J1X8 118 aa11.96□□□□□ -0.49
SMG6-215ENST00000574501 ACTL6BO94805 426 aa11.96□□□□□ -0.49
SMG6-215ENST00000574501 REG1AP05451 166 aa11.96□□□□□ -0.49
SMG6-215ENST00000574501 IGHV3-43DP0DP04 118 aa11.96□□□□□ -0.49
SMG6-215ENST00000574501 MPV17L2Q567V2 206 aa11.96□□□□□ -0.49
SMG6-215ENST00000574501 OCIAD2Q56VL3 154 aa11.96□□□□□ -0.49
SMG6-215ENST00000574501 SMIM15Q7Z3B0 74 aa11.96□□□□□ -0.49
SMG6-215ENST00000574501 ABHD12Q8N2K0 398 aa11.96□□□□□ -0.49
SMG6-215ENST00000574501 C18orf32Q8TCD1 76 aa11.96□□□□□ -0.49
SMG6-215ENST00000574501 PHF7Q9BWX1 381 aaPredicted RBP11.96□□□□□ -0.49
SMG6-215ENST00000574501 HEYLQ9NQ87 328 aaPredicted RBP11.96□□□□□ -0.49
SMG6-215ENST00000574501 TNRC6BQ9UPQ9 1833 aaKnown RBP11.96□□□□□ -0.5
SMG6-215ENST00000574501 OR5B21A6NL26 309 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 DEFB108AA8MXU0 73 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 C12orf77C9JDV5 145 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 MPDU1O75352 247 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 RPL19P84098 196 aaKnown RBP11.96□□□□□ -0.5
SMG6-215ENST00000574501 PRR31Q5SQ13 230 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 SYT13Q7L8C5 426 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 SPATA12Q7Z6I5 190 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 VKORC1L1Q8N0U8 176 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 GCNT2Q8N0V5 402 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 KIR3DL3Q8N743 410 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 C11orf52Q96A22 123 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 SH2D2AQ9NP31 389 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 KCNIP1Q9NZI2 227 aa11.96□□□□□ -0.5
SMG6-215ENST00000574501 FAM181BA6NEQ2 426 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 ZNF891A8MT65 544 aaPredicted RBP11.95□□□□□ -0.5
SMG6-215ENST00000574501 M0R2Z0 102 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 TFF1P04155 84 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 MGST1P10620 155 aaKnown RBP11.95□□□□□ -0.5
SMG6-215ENST00000574501 SRYQ05066 204 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 MRPL14Q6P1L8 145 aaKnown RBP11.95□□□□□ -0.5
SMG6-215ENST00000574501 WDR86Q86TI4 376 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 RPS19BP1Q86WX3 136 aaKnown RBP11.95□□□□□ -0.5
SMG6-215ENST00000574501 PNKDQ8N490 385 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 NUDT10Q8NFP7 164 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 ZNF596Q8TC21 504 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 FAM122AQ96E09 287 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 C1orf159Q96HA4 380 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 HES4Q9HCC6 221 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 GP6Q9HCN6 339 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 LY96Q9Y6Y9 160 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 OR2T8A6NH00 312 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 J3QT63 122 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 CDIPTO14735 213 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 PSPNO60542 156 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 HSBP1O75506 76 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 HLA-DQA1P01909 254 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 USF1P22415 310 aaPredicted RBP11.95□□□□□ -0.5
SMG6-215ENST00000574501 SELENOVP59797 346 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 CCL7P80098 99 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 OR4A47Q6IF82 309 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 NHLRC2Q8NBF2 726 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 ZBTB34Q8NCN2 500 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 PLPPR2Q96GM1 343 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 MPC1Q9Y5U8 109 aa11.95□□□□□ -0.5
SMG6-215ENST00000574501 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 H0YJW9 148 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 SS18L1O75177 396 aaPredicted RBP11.94□□□□□ -0.5
SMG6-215ENST00000574501 HBZP02008 142 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 RHOBP62745 196 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 ARG2P78540 354 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 AESQ08117 197 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 STPG3Q8N7X2 389 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 SCCPDHQ8NBX0 429 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 NINJ1Q92982 152 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 IMMP1LQ96LU5 166 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 SSBP3Q9BWW4 388 aaPredicted RBP11.94□□□□□ -0.5
SMG6-215ENST00000574501 PKIBQ9C010 78 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 FAM234AQ9H0X4 552 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 OCIAD1Q9NX40 245 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 TECRQ9NZ01 308 aaKnown RBP11.94□□□□□ -0.5
SMG6-215ENST00000574501 WASHC3Q9Y3C0 194 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 AHRRA9YTQ3 701 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 COX6A1P12074 109 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 IGFBP4P22692 258 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 GABRA2P47869 451 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 GUSBP11Q6P575 273 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 MIR17HGQ75NE6 70 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 RFESDQ8TAC1 157 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 FAM168AQ92567 244 aa11.94□□□□□ -0.5
SMG6-215ENST00000574501 A0A1W2PQM1 296 aa11.93□□□□□ -0.5
SMG6-215ENST00000574501 TAX1BP3O14907 124 aa11.93□□□□□ -0.5
SMG6-215ENST00000574501 MT-CO2P00403 227 aa11.93□□□□□ -0.5
SMG6-215ENST00000574501 GPR6P46095 362 aaPredicted RBP11.93□□□□□ -0.5
SMG6-215ENST00000574501 DUSP3P51452 185 aaPredicted RBP11.93□□□□□ -0.5
SMG6-215ENST00000574501 PSG5Q15238 335 aa11.93□□□□□ -0.5
SMG6-215ENST00000574501 IBA57Q5T440 356 aaKnown RBP11.93□□□□□ -0.5
SMG6-215ENST00000574501 RNASEKQ6P5S7 137 aaKnown RBP11.93□□□□□ -0.5
SMG6-215ENST00000574501 TPRX1Q8N7U7 411 aa11.93□□□□□ -0.5
SMG6-215ENST00000574501 TAAR6Q96RI8 345 aa11.93□□□□□ -0.5
SMG6-215ENST00000574501 CLCF1Q9UBD9 225 aa11.93□□□□□ -0.5
SMG6-215ENST00000574501 FAM186AA6NE01 2351 aa11.93□□□□□ -0.5
SMG6-215ENST00000574501 IGHV5-10-1A0A0J9YXX1 117 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 CELA3BP08861 270 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 UBE2G1P62253 170 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 LTC4SQ16873 150 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms