RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 IFNA6P05013 189 aa21.36■■□□□ 1.01
SCARF1-207ENST00000573867 AREGP15514 252 aa21.36■■□□□ 1.01
SCARF1-207ENST00000573867 FAAP20Q6NZ36 180 aa21.36■■□□□ 1.01
SCARF1-207ENST00000573867 LPCAT3Q6P1A2 487 aa21.36■■□□□ 1.01
SCARF1-207ENST00000573867 DMBX1Q8NFW5 382 aa21.36■■□□□ 1.01
SCARF1-207ENST00000573867 MRGPRFQ96AM1 343 aa21.36■■□□□ 1.01
SCARF1-207ENST00000573867 TRBV9A0A0B4J1U6 114 aa21.35■■□□□ 1.01
SCARF1-207ENST00000573867 A0A0G2JLM5 398 aa21.35■■□□□ 1.01
SCARF1-207ENST00000573867 WI2-2373I1.2A0A1W2PRP0 233 aa21.35■■□□□ 1.01
SCARF1-207ENST00000573867 K7EIL1 84 aa21.35■■□□□ 1.01
SCARF1-207ENST00000573867 RAB3DO95716 219 aa21.35■■□□□ 1.01
SCARF1-207ENST00000573867 PI3P19957 117 aa21.35■■□□□ 1.01
SCARF1-207ENST00000573867 TAS2R19P59542 299 aa21.35■■□□□ 1.01
SCARF1-207ENST00000573867 STEAP1BQ6NZ63 245 aa21.35■■□□□ 1.01
SCARF1-207ENST00000573867 AKIP1Q9NQ31 210 aa21.35■■□□□ 1.01
SCARF1-207ENST00000573867 SLC2A9Q9NRM0 540 aa21.35■■□□□ 1.01
SCARF1-207ENST00000573867 ANKRD34BA5PLL1 514 aa21.34■■□□□ 1.01
SCARF1-207ENST00000573867 MARCH11A6NNE9 402 aa21.34■■□□□ 1.01
SCARF1-207ENST00000573867 OVOL1O14753 267 aa21.34■■□□□ 1.01
SCARF1-207ENST00000573867 TRBV12-3P01733 135 aa21.34■■□□□ 1.01
SCARF1-207ENST00000573867 OR2B8PP59922 312 aa21.34■■□□□ 1.01
SCARF1-207ENST00000573867 RHOGP84095 191 aa21.34■■□□□ 1.01
SCARF1-207ENST00000573867 SSBP1Q04837 148 aaKnown RBP21.34■■□□□ 1.01
SCARF1-207ENST00000573867 C9orf66Q5T8R8 295 aa21.34■■□□□ 1.01
SCARF1-207ENST00000573867 ZNF343Q6P1L6 599 aa21.34■■□□□ 1.01
SCARF1-207ENST00000573867 MRAPQ8TCY5 172 aa21.34■■□□□ 1.01
SCARF1-207ENST00000573867 NPIPB5A8MRT5 1133 aa21.33■■□□□ 1.01
SCARF1-207ENST00000573867 KRASP01116 189 aa21.33■■□□□ 1.01
SCARF1-207ENST00000573867 IGKV1-39P01597 117 aa21.33■■□□□ 1.01
SCARF1-207ENST00000573867 IGKV1D-39P04432 117 aa21.33■■□□□ 1.01
SCARF1-207ENST00000573867 PGAM2P15259 253 aa21.33■■□□□ 1.01
SCARF1-207ENST00000573867 G6PCP35575 357 aa21.33■■□□□ 1.01
SCARF1-207ENST00000573867 PPP5CP53041 499 aa21.33■■□□□ 1.01
SCARF1-207ENST00000573867 USMG5Q96IX5 58 aa21.33■■□□□ 1.01
SCARF1-207ENST00000573867 RSL24D1Q9UHA3 163 aaKnown RBP21.33■■□□□ 1.01
SCARF1-207ENST00000573867 ZNF257Q9Y2Q1 563 aa21.32■■□□□ 1
SCARF1-207ENST00000573867 GSTZ1O43708 216 aaPredicted RBP21.31■■□□□ 1
SCARF1-207ENST00000573867 REG1AP05451 166 aa21.31■■□□□ 1
SCARF1-207ENST00000573867 CRYGCP07315 174 aa21.31■■□□□ 1
SCARF1-207ENST00000573867 ERVK-16P61578 105 aa21.31■■□□□ 1
SCARF1-207ENST00000573867 RND3P61587 244 aa21.31■■□□□ 1
SCARF1-207ENST00000573867 TERB2Q8NHR7 220 aa21.31■■□□□ 1
SCARF1-207ENST00000573867 FANCD2OSQ96PS1 177 aa21.31■■□□□ 1
SCARF1-207ENST00000573867 RANGRFQ9HD47 186 aaPredicted RBP21.31■■□□□ 1
SCARF1-207ENST00000573867 FAM212BQ9NTI7 297 aaPredicted RBP21.31■■□□□ 1
SCARF1-207ENST00000573867 RABL2AQ9UBK7 228 aaPredicted RBP21.31■■□□□ 1
SCARF1-207ENST00000573867 RABL2BQ9UNT1 228 aa21.31■■□□□ 1
SCARF1-207ENST00000573867 NSG2Q9Y328 171 aa21.31■■□□□ 1
SCARF1-207ENST00000573867 IGLC7A0M8Q6 106 aa21.3■■□□□ 1
SCARF1-207ENST00000573867 OR2J3O76001 311 aa21.3■■□□□ 1
SCARF1-207ENST00000573867 CTRB1P17538 263 aa21.3■■□□□ 1
SCARF1-207ENST00000573867 PSMB6P28072 239 aa21.3■■□□□ 1
SCARF1-207ENST00000573867 SCGB2B2Q4G0G5 96 aa21.3■■□□□ 1
SCARF1-207ENST00000573867 CTRB2Q6GPI1 263 aa21.3■■□□□ 1
SCARF1-207ENST00000573867 SLC25A42Q86VD7 318 aa21.3■■□□□ 1
SCARF1-207ENST00000573867 OR4C16Q8NGL9 310 aa21.3■■□□□ 1
SCARF1-207ENST00000573867 FABP12A6NFH5 140 aa21.29■■□□□ 1
SCARF1-207ENST00000573867 FAM223BA6NKX1 122 aa21.29■■□□□ 1
SCARF1-207ENST00000573867 FGF2P09038 288 aa21.29■■□□□ 1
SCARF1-207ENST00000573867 S100GP29377 79 aa21.29■■□□□ 1
SCARF1-207ENST00000573867 PIGPP57054 158 aa21.29■■□□□ 1
SCARF1-207ENST00000573867 FAM223AQ8IWN6 122 aa21.29■■□□□ 1
SCARF1-207ENST00000573867 CADM3Q8N126 398 aa21.29■■□□□ 1
SCARF1-207ENST00000573867 OR10W1Q8NGF6 305 aa21.29■■□□□ 1
SCARF1-207ENST00000573867 OR13C8Q8NGS7 320 aa21.29■■□□□ 1
SCARF1-207ENST00000573867 MARCH1Q8TCQ1 289 aa21.29■■□□□ 1
SCARF1-207ENST00000573867 ZNF486Q96H40 463 aaPredicted RBP21.29■■□□□ 1
SCARF1-207ENST00000573867 TEX50A0A1B0GTY4 177 aa21.28■■□□□ 1
SCARF1-207ENST00000573867 DPPA5A6NC42 116 aa21.28■■□□□ 1
SCARF1-207ENST00000573867 DBX1A6NMT0 343 aa21.28■■□□□ 1
SCARF1-207ENST00000573867 ZNF701M0R085 212 aaPredicted RBP21.28■■□□□ 1
SCARF1-207ENST00000573867 PTBP1P26599 531 aaKnown RBP eCLIP21.28■■□□□ 1
SCARF1-207ENST00000573867 EXOSC2Q13868 293 aaKnown RBP21.28■■□□□ 1
SCARF1-207ENST00000573867 KLK9Q2XQG4 91 aa21.28■■□□□ 1
SCARF1-207ENST00000573867 NECAP1Q8NC96 275 aa21.28■■□□□ 1
SCARF1-207ENST00000573867 SEC22AQ96IW7 307 aa21.28■■□□□ 1
SCARF1-207ENST00000573867 TP53RKQ96S44 253 aa21.28■■□□□ 1
SCARF1-207ENST00000573867 COMMD5Q9GZQ3 224 aa21.28■■□□□ 1
SCARF1-207ENST00000573867 PEF1Q9UBV8 284 aaKnown RBP21.28■■□□□ 1
SCARF1-207ENST00000573867 KLK9Q9UKQ9 250 aa21.28■■□□□ 1
SCARF1-207ENST00000573867 V9GYH0 126 aa21.28■■□□□ 1
SCARF1-207ENST00000573867 ANKRD20A5PA0PJZ0 165 aa21.27■■□□□ 1
SCARF1-207ENST00000573867 ATP5G2Q06055 141 aa21.27■■□□□ 1
SCARF1-207ENST00000573867 MEF2DQ14814 521 aa21.27■■□□□ 1
SCARF1-207ENST00000573867 ACSM6Q6P461 480 aa21.27■■□□□ 1
SCARF1-207ENST00000573867 QTRT1Q9BXR0 403 aaKnown RBP21.27■■□□□ 1
SCARF1-207ENST00000573867 DMRT1Q9Y5R6 373 aa21.27■■□□□ 1
SCARF1-207ENST00000573867 NDUFB8O95169 186 aa21.26■□□□□ 0.99
SCARF1-207ENST00000573867 AKAIN1P0CW23 69 aa21.26■□□□□ 0.99
SCARF1-207ENST00000573867 C15orf32Q32M92 178 aa21.26■□□□□ 0.99
SCARF1-207ENST00000573867 FBXL7Q9UJT9 491 aa21.26■□□□□ 0.99
SCARF1-207ENST00000573867 ZP3P21754 424 aa21.25■□□□□ 0.99
SCARF1-207ENST00000573867 KLF5Q13887 457 aaPredicted RBP21.25■□□□□ 0.99
SCARF1-207ENST00000573867 DNAH9Q9NYC9 4486 aa21.24■□□□□ 0.99
SCARF1-207ENST00000573867 IGLV11-55A0A075B6I3 123 aa21.24■□□□□ 0.99
SCARF1-207ENST00000573867 H0Y980 276 aa21.24■□□□□ 0.99
SCARF1-207ENST00000573867 BMPR1BO00238 502 aa21.24■□□□□ 0.99
SCARF1-207ENST00000573867 SAP30O75446 220 aa21.24■□□□□ 0.99
SCARF1-207ENST00000573867 CTSDP07339 412 aaPredicted RBP21.24■□□□□ 0.99
SCARF1-207ENST00000573867 ECI1P42126 302 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms