RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 C12orf54Q6X4T0 127 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 SLC35G3Q8N808 338 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 LRTM2Q8N967 370 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 OR4A16Q8NH70 328 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 LSM10Q969L4 123 aaKnown RBP18.34■□□□□ 0.53
TVP23A-206ENST00000572980 FAM103A1Q9BTL3 118 aaKnown RBP18.34■□□□□ 0.53
TVP23A-206ENST00000572980 SHPKQ9UHJ6 478 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 PRNDQ9UKY0 176 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 FBXO7Q9Y3I1 522 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 TNCP24821 2201 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 TRAV41A0A0B4J266 112 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 EGR2P11161 476 aaPredicted RBP18.34■□□□□ 0.53
TVP23A-206ENST00000572980 CRIP2P52943 208 aaPredicted RBP18.34■□□□□ 0.53
TVP23A-206ENST00000572980 ANKRD55Q3KP44 614 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 AKIRIN2Q53H80 203 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 COQ8AQ8NI60 647 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 PHB2Q99623 299 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 SPIN2AQ99865 258 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 SPIN2BQ9BPZ2 258 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 NSG2Q9Y328 171 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 WSB1Q9Y6I7 421 aa18.34■□□□□ 0.53
TVP23A-206ENST00000572980 DUXBA0A1W2PPF3 345 aa18.33■□□□□ 0.52
TVP23A-206ENST00000572980 PSMB11A5LHX3 300 aa18.33■□□□□ 0.52
TVP23A-206ENST00000572980 MSGN1A6NI15 193 aa18.33■□□□□ 0.52
TVP23A-206ENST00000572980 RBMXL2O75526 392 aaKnown RBP18.33■□□□□ 0.52
TVP23A-206ENST00000572980 P0C879 139 aa18.33■□□□□ 0.52
TVP23A-206ENST00000572980 RPL27AP46776 148 aaKnown RBP18.33■□□□□ 0.52
TVP23A-206ENST00000572980 LFNGQ8NES3 379 aa18.33■□□□□ 0.52
TVP23A-206ENST00000572980 TMEM68Q96MH6 324 aa18.33■□□□□ 0.52
TVP23A-206ENST00000572980 COL6A5A8TX70 2615 aa18.32■□□□□ 0.52
TVP23A-206ENST00000572980 INMT-MINDY4F8WBC2 141 aa18.32■□□□□ 0.52
TVP23A-206ENST00000572980 ECSCRQ19T08 205 aa18.32■□□□□ 0.52
TVP23A-206ENST00000572980 C10orf55Q5SWW7 151 aa18.32■□□□□ 0.52
TVP23A-206ENST00000572980 LYZL2Q7Z4W2 148 aa18.32■□□□□ 0.52
TVP23A-206ENST00000572980 WFDC12Q8WWY7 111 aa18.32■□□□□ 0.52
TVP23A-206ENST00000572980 MARVELD1Q9BSK0 173 aa18.32■□□□□ 0.52
TVP23A-206ENST00000572980 C15orf61A6NNL5 157 aa18.31■□□□□ 0.52
TVP23A-206ENST00000572980 G3V318 75 aa18.31■□□□□ 0.52
TVP23A-206ENST00000572980 OPN1MWP04001 364 aa18.31■□□□□ 0.52
TVP23A-206ENST00000572980 OPN1MW2P0DN77 364 aa18.31■□□□□ 0.52
TVP23A-206ENST00000572980 OPN1MW3P0DN78 364 aa18.31■□□□□ 0.52
TVP23A-206ENST00000572980 IZUMO4Q1ZYL8 232 aa18.31■□□□□ 0.52
TVP23A-206ENST00000572980 UNQ5815/PRO19632Q6UWF5 114 aa18.31■□□□□ 0.52
TVP23A-206ENST00000572980 ZNF329Q86UD4 541 aa18.31■□□□□ 0.52
TVP23A-206ENST00000572980 OR5AU1Q8NGC0 362 aa18.31■□□□□ 0.52
TVP23A-206ENST00000572980 TMEM14BQ9NUH8 114 aa18.31■□□□□ 0.52
TVP23A-206ENST00000572980 OR51B2Q9Y5P1 312 aa18.31■□□□□ 0.52
TVP23A-206ENST00000572980 IL5P05113 134 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 OR2B8PP59922 312 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 C3orf56Q8N813 242 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 OR52B4Q8NGK2 314 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 OR1L8Q8NGR8 309 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 OR5B3Q8NH48 314 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 MITD1Q8WV92 249 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 FYTTD1Q96QD9 318 aaKnown RBP18.3■□□□□ 0.52
TVP23A-206ENST00000572980 FOXA2Q9Y261 457 aaPredicted RBP18.3■□□□□ 0.52
TVP23A-206ENST00000572980 A0A0B4J293 547 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 A0A0G2JRQ6 117 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 TEX50A0A1B0GTY4 177 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 DHFRP00374 187 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 RGS21Q2M5E4 152 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 ZNF429Q86V71 674 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 COMMD1Q8N668 190 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 ZNF431Q8TF32 576 aaPredicted RBP18.3■□□□□ 0.52
TVP23A-206ENST00000572980 WIPF2Q8TF74 440 aaPredicted RBP18.3■□□□□ 0.52
TVP23A-206ENST00000572980 GPR146Q96CH1 333 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 QTRT1Q9BXR0 403 aaKnown RBP18.3■□□□□ 0.52
TVP23A-206ENST00000572980 GPN1Q9HCN4 374 aaPredicted RBP18.3■□□□□ 0.52
TVP23A-206ENST00000572980 ZNF257Q9Y2Q1 563 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 TMED3Q9Y3Q3 217 aa18.3■□□□□ 0.52
TVP23A-206ENST00000572980 PRAF2O60831 178 aa18.29■□□□□ 0.52
TVP23A-206ENST00000572980 MYOD1P15172 320 aa18.29■□□□□ 0.52
TVP23A-206ENST00000572980 PPIFP30405 207 aaKnown RBP18.29■□□□□ 0.52
TVP23A-206ENST00000572980 THOC7Q6I9Y2 204 aaKnown RBP18.29■□□□□ 0.52
TVP23A-206ENST00000572980 TEX38Q6PEX7 206 aa18.29■□□□□ 0.52
TVP23A-206ENST00000572980 MINDY2Q8NBR6 621 aa18.29■□□□□ 0.52
TVP23A-206ENST00000572980 OR4X2Q8NGF9 303 aa18.29■□□□□ 0.52
TVP23A-206ENST00000572980 SEC22CQ9BRL7 303 aa18.29■□□□□ 0.52
TVP23A-206ENST00000572980 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.29■□□□□ 0.52
TVP23A-206ENST00000572980 A0A1W2PN81 502 aa18.28■□□□□ 0.52
TVP23A-206ENST00000572980 E7EUB6 86 aa18.28■□□□□ 0.52
TVP23A-206ENST00000572980 SPNP16150 400 aa18.28■□□□□ 0.52
TVP23A-206ENST00000572980 CHRNA7P36544 502 aa18.28■□□□□ 0.52
TVP23A-206ENST00000572980 CFHR3Q02985 330 aa18.28■□□□□ 0.52
TVP23A-206ENST00000572980 C19orf54Q5BKX5 351 aa18.28■□□□□ 0.52
TVP23A-206ENST00000572980 NMSQ5H8A3 153 aa18.28■□□□□ 0.52
TVP23A-206ENST00000572980 PDCD10Q9BUL8 212 aa18.28■□□□□ 0.52
TVP23A-206ENST00000572980 ZNF747Q9BV97 191 aa18.28■□□□□ 0.52
TVP23A-206ENST00000572980 CACNG5Q9UF02 275 aa18.28■□□□□ 0.52
TVP23A-206ENST00000572980 DBX1A6NMT0 343 aa18.27■□□□□ 0.52
TVP23A-206ENST00000572980 IGHG4P01861 327 aa18.27■□□□□ 0.52
TVP23A-206ENST00000572980 HOXB5P09067 269 aa18.27■□□□□ 0.52
TVP23A-206ENST00000572980 TRAPPC2P0DI81 140 aa18.27■□□□□ 0.52
TVP23A-206ENST00000572980 TRAPPC2BP0DI82 140 aa18.27■□□□□ 0.52
TVP23A-206ENST00000572980 APELAP0DMC3 54 aa18.27■□□□□ 0.52
TVP23A-206ENST00000572980 SULT1A3P0DMM9 295 aa18.27■□□□□ 0.52
TVP23A-206ENST00000572980 SULT1A4P0DMN0 295 aa18.27■□□□□ 0.52
TVP23A-206ENST00000572980 HSPE1P61604 102 aaKnown RBP18.27■□□□□ 0.52
TVP23A-206ENST00000572980 Q6ZRM9 215 aa18.27■□□□□ 0.52
TVP23A-206ENST00000572980 OR5M8Q8NGP6 311 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms