RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 SSBP2P81877 361 aaPredicted RBP6.05□□□□□ -1.44
SMG6-211ENST00000572369 C19orf54Q5BKX5 351 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 C10orf55Q5SWW7 151 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 SLC25A42Q86VD7 318 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 MRPL41Q8IXM3 137 aaKnown RBP6.05□□□□□ -1.44
SMG6-211ENST00000572369 PUSL1Q8N0Z8 303 aaKnown RBP6.05□□□□□ -1.44
SMG6-211ENST00000572369 LINC00482Q8N8I6 264 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 OR4C16Q8NGL9 310 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 OR1N2Q8NGR9 330 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 MARCH1Q8TCQ1 289 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 ZNF486Q96H40 463 aaPredicted RBP6.05□□□□□ -1.44
SMG6-211ENST00000572369 THAP7Q9BT49 309 aaPredicted RBP6.05□□□□□ -1.44
SMG6-211ENST00000572369 MCRIP2Q9BUT9 160 aaKnown RBP6.05□□□□□ -1.44
SMG6-211ENST00000572369 GPR61Q9BZJ8 451 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 SLC2A9Q9NRM0 540 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 TMEM140Q9NV12 185 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 MCUBQ9NWR8 336 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 BET1LQ9NYM9 111 aa6.05□□□□□ -1.44
SMG6-211ENST00000572369 C14orf166Q9Y224 244 aaKnown RBP6.05□□□□□ -1.44
SMG6-211ENST00000572369 UBR4Q5T4S7 5183 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 TEX13DA0A0J9YY54 714 aaPredicted RBP6.04□□□□□ -1.44
SMG6-211ENST00000572369 C3orf85A0A1B0GTC6 90 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 ANKRD20A5PA0PJZ0 165 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 HMX3A6NHT5 357 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 LINC01619G3V211 115 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 UPK2O00526 184 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 RBMXL2O75526 392 aaKnown RBP6.04□□□□□ -1.44
SMG6-211ENST00000572369 DHFRP00374 187 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 LGALS1P09382 135 aaKnown RBP6.04□□□□□ -1.44
SMG6-211ENST00000572369 OR8U8P0C7N1 319 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 DEFA4P12838 97 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 HLA-GP17693 338 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 ECI1P42126 302 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 MECP2P51608 486 aaKnown RBP6.04□□□□□ -1.44
SMG6-211ENST00000572369 AP3S2P59780 193 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 ZNF616Q08AN1 781 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 MRGPRG-AS1Q2M3A8 158 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 TRIM16LQ309B1 348 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 BEAN1Q3B7T3 259 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 ETV3LQ6ZN32 361 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 H2BFWTQ7Z2G1 175 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 Q8N402 240 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 TOMM5Q8N4H5 51 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 OR13C8Q8NGS7 320 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 RNASE11Q8TAA1 199 aaKnown RBP6.04□□□□□ -1.44
SMG6-211ENST00000572369 MYOZ3Q8TDC0 251 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 P2RX4Q99571 388 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 PRRT1Q99946 306 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 HINT2Q9BX68 163 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 ALX4Q9H161 411 aaPredicted RBP6.04□□□□□ -1.44
SMG6-211ENST00000572369 SCP2D1Q9UJQ7 156 aa6.04□□□□□ -1.44
SMG6-211ENST00000572369 TRAV3A0A0B4J244 114 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 ANKRD34BA5PLL1 514 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 I3L521 148 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 ATG12O94817 140 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 PRH1P02810 166 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 CTSDP07339 412 aaPredicted RBP6.03□□□□□ -1.44
SMG6-211ENST00000572369 MYOD1P15172 320 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 AKR1C2P52895 323 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 RND3P61587 244 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 RUNX1Q01196 453 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 DEFA5Q01523 94 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 ATP5G2Q06055 141 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 POU2AF1Q16633 256 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 ZNF585BQ52M93 769 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 SAMD5Q5TGI4 173 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 ASPHD1Q5U4P2 390 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 ZNF57Q68EA5 555 aaPredicted RBP6.03□□□□□ -1.44
SMG6-211ENST00000572369 LHFPL1Q86WI0 220 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 WFDC9Q8NEX5 89 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 OR51S1Q8NGJ8 323 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 OR4A16Q8NH70 328 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 USMG5Q96IX5 58 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 SCGB3A2Q96PL1 93 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 TSC22D3Q99576 134 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 FAM212BQ9NTI7 297 aaPredicted RBP6.03□□□□□ -1.44
SMG6-211ENST00000572369 ZNF257Q9Y2Q1 563 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 V9GYH0 126 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 CSMD3Q7Z407 3707 aa6.03□□□□□ -1.44
SMG6-211ENST00000572369 IGHV4OR15-8A0A075B7B6 117 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 A0A087WW49 117 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 TEX50A0A1B0GTY4 177 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 FAM223BA6NKX1 122 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 NPIPB5A8MRT5 1133 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 SEC14L6B5MCN3 397 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 H0Y980 276 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 OVOL1O14753 267 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 CYB5BO43169 146 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 OR2J3O76001 311 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 HSPB1P04792 205 aaKnown RBP6.02□□□□□ -1.45
SMG6-211ENST00000572369 REG1AP05451 166 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 IL6RP08887 468 aaPredicted RBP6.02□□□□□ -1.45
SMG6-211ENST00000572369 ZNF735P0CB33 412 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 TRAPPC2P0DI81 140 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 TRAPPC2BP0DI82 140 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 PTBP1P26599 531 aaKnown RBP eCLIP6.02□□□□□ -1.454e-7■■■■□ 26.4
SMG6-211ENST00000572369 SLURP1P55000 103 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 OR2B8PP59922 312 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 RHOGP84095 191 aa6.02□□□□□ -1.45
SMG6-211ENST00000572369 KIAA0141Q14154 515 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms