RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 SSX9Q7RTT3 188 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 GPHB5Q86YW7 130 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 GVQW1Q8N7I0 195 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 OR5H6Q8NGV6 325 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 CCL28Q9NRJ3 127 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 EHFQ9NZC4 300 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 KLK9Q9UKQ9 250 aa7.41□□□□□ -1.22
CIITA-207ENST00000571545 HMX3A6NHT5 357 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 A8MWP6 167 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 TNFSF12O43508 249 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 PRH1P02810 166 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 IL6RP08887 468 aaPredicted RBP7.4□□□□□ -1.22
CIITA-207ENST00000571545 CLEC2LP0C7M8 214 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 CTRB1P17538 263 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 CD81P60033 236 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 ANKRD55Q3KP44 614 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 CASC10Q5T4H9 136 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 CTRB2Q6GPI1 263 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 LPCAT3Q6P1A2 487 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 SLC16A13Q7RTY0 426 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 TMEM17Q86X19 198 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 CADM3Q8N126 398 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 DMBX1Q8NFW5 382 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 TSPAN14Q8NG11 270 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 OR5H2Q8NGV7 314 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 IL17DQ8TAD2 202 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 MARC2Q969Z3 335 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 CMTM3Q96MX0 182 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 ATP6V0BQ99437 205 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 THAP7Q9BT49 309 aaPredicted RBP7.4□□□□□ -1.22
CIITA-207ENST00000571545 QTRT1Q9BXR0 403 aaKnown RBP7.4□□□□□ -1.22
CIITA-207ENST00000571545 RNF167Q9H6Y7 350 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 ZC4H2Q9NQZ6 224 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 ADAM30Q9UKF2 790 aa7.4□□□□□ -1.22
CIITA-207ENST00000571545 NBEAL2Q6ZNJ1 2754 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 SMIM31A0A1B0GVY4 71 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 C2orf70A6NJV1 201 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 MARCH11A6NNE9 402 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 SULT1C2O00338 296 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 MYOD1P15172 320 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 AREGP15514 252 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 MECP2P51608 486 aaKnown RBP7.39□□□□□ -1.23
CIITA-207ENST00000571545 OR2B8PP59922 312 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 CD300EQ496F6 205 aaPredicted RBP7.39□□□□□ -1.23
CIITA-207ENST00000571545 ZNF818PQ6ZRF7 136 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 SAMD12Q8N8I0 201 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 OR1L6Q8NGR2 347 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 OR51H1Q8NH63 302 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 MOB3AQ96BX8 217 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 TSC22D3Q99576 134 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 NEURL2Q9BR09 285 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 FAM212BQ9NTI7 297 aaPredicted RBP7.39□□□□□ -1.23
CIITA-207ENST00000571545 TMEM140Q9NV12 185 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 FKBP11Q9NYL4 201 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 ANAPC10Q9UM13 185 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 CEPT1Q9Y6K0 416 aa7.39□□□□□ -1.23
CIITA-207ENST00000571545 IGLV11-55A0A075B6I3 123 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 PPP5D1E7EU14 171 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 UPK2O00526 184 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 RBMXL2O75526 392 aaKnown RBP7.38□□□□□ -1.23
CIITA-207ENST00000571545 SNAPC5O75971 98 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 FOLR2P14207 255 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 F2RP25116 425 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 PRSS3P35030 304 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 BRWD1-AS2P59051 145 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 TAS2R20P59543 309 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 HAGHQ16775 308 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 DEFB114Q30KQ6 69 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 ZNF57Q68EA5 555 aaPredicted RBP7.38□□□□□ -1.23
CIITA-207ENST00000571545 DHRS11Q6UWP2 260 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 CLEC19AQ6UXS0 136 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 GDPD1Q8N9F7 314 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 OR1L8Q8NGR8 309 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 OR6F1Q8NGZ6 308 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 VN1R17PQ8TDU5 208 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 LSM10Q969L4 123 aaKnown RBP7.38□□□□□ -1.23
CIITA-207ENST00000571545 SLC25A46Q96AG3 418 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 CCDC140Q96MF4 163 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 FANCD2OSQ96PS1 177 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 ZNF2Q9BSG1 426 aaPredicted RBP7.38□□□□□ -1.23
CIITA-207ENST00000571545 SCPEP1Q9HB40 452 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 GAR1Q9NY12 217 aaKnown RBP7.38□□□□□ -1.23
CIITA-207ENST00000571545 UFC1Q9Y3C8 167 aa7.38□□□□□ -1.23
CIITA-207ENST00000571545 TRAV25A0A0B4J276 109 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 IGLC7A0M8Q6 106 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 ZNF320A2RRD8 509 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 GPR31O00270 319 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 S1PR2O95136 353 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 NDUFB8O95169 186 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 OR2C1O95371 312 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 APOA1P02647 267 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 RLN1P04808 185 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 TRAPPC2P0DI81 140 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 TRAPPC2BP0DI82 140 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 NAT1P18440 290 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 CBLN1P23435 193 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 PTBP1P26599 531 aaKnown RBP eCLIP7.37□□□□□ -1.23
CIITA-207ENST00000571545 GNRHRP30968 328 aa7.37□□□□□ -1.23
CIITA-207ENST00000571545 ELLP55199 621 aaPredicted RBP7.37□□□□□ -1.23
CIITA-207ENST00000571545 TSPAN5P62079 268 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms