RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 RPL8P62917 257 aaKnown RBP5.41□□□□□ -1.54
SMG6-209ENST00000571442 SUPT4H1P63272 117 aaKnown RBP5.41□□□□□ -1.54
SMG6-209ENST00000571442 SPANXN2Q5MJ10 180 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 LPCAT3Q6P1A2 487 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 C1QL4Q86Z23 238 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 ZNF695Q8IW36 515 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 MRPL41Q8IXM3 137 aaKnown RBP5.41□□□□□ -1.54
SMG6-209ENST00000571442 MMD2Q8IY49 270 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 CMTM1Q8IZ96 169 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 TOMM5Q8N4H5 51 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 LINC00482Q8N8I6 264 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 GDPD1Q8N9F7 314 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 POC5Q8NA72 575 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 DMBX1Q8NFW5 382 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 OR10W1Q8NGF6 305 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 GLYATL2Q8WU03 294 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 BORCS5Q969J3 196 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 ZNF486Q96H40 463 aaPredicted RBP5.41□□□□□ -1.54
SMG6-209ENST00000571442 FYTTD1Q96QD9 318 aaKnown RBP5.41□□□□□ -1.54
SMG6-209ENST00000571442 P2RX4Q99571 388 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 NAA60Q9H7X0 242 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 ZFP57Q9NU63 452 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 DMRT1Q9Y5R6 373 aa5.41□□□□□ -1.54
SMG6-209ENST00000571442 IGHV4OR15-8A0A075B7B6 117 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 A0A087WW49 117 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 C3orf85A0A1B0GTC6 90 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 TEX50A0A1B0GTY4 177 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 IGLC7A0M8Q6 106 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 CRYM-AS1A6NIL9 109 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 NUDT19A8MXV4 375 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 TRBV12-3P01733 135 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 UCP1P25874 307 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 MFAP2P55001 183 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 TPPP2P59282 170 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 IFITM3Q01628 133 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 TMEM267Q0VDI3 215 aaPredicted RBP5.4□□□□□ -1.54
SMG6-209ENST00000571442 OXLD1Q5BKU9 147 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 ZNF57Q68EA5 555 aaPredicted RBP5.4□□□□□ -1.54
SMG6-209ENST00000571442 C11orf87Q6NUJ2 197 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 Q6ZRM9 215 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 TCTEX1D1Q8N7M0 179 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 OR5M8Q8NGP6 311 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 OR4A5Q8NH83 315 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 VSTM2AQ8TAG5 236 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 ZFAND1Q8TCF1 268 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 CD300LFQ8TDQ1 290 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 C4orf3Q8WVX3 66 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 FANCD2OSQ96PS1 177 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 PHB2Q99623 299 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 PRRT1Q99946 306 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 GON7Q9BXV9 100 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 FAM212BQ9NTI7 297 aaPredicted RBP5.4□□□□□ -1.54
SMG6-209ENST00000571442 COPZ2Q9P299 210 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 FLVCR2Q9UPI3 526 aa5.4□□□□□ -1.54
SMG6-209ENST00000571442 NOTCH3Q9UM47 2321 aa5.4□□□□□ -1.55
SMG6-209ENST00000571442 TRBV9A0A0B4J1U6 114 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 A0A0B4J293 547 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 TEX13DA0A0J9YY54 714 aaPredicted RBP5.39□□□□□ -1.55
SMG6-209ENST00000571442 CCL24O00175 119 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 OR2J3O76001 311 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 TRGV3P03979 118 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 CRYGCP07315 174 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 IGLL1P15814 213 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 CTRB1P17538 263 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 SLURP1P55000 103 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 WT1-ASQ06250 92 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 FHL3Q13643 280 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 TMEM187Q14656 261 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 SURF2Q15527 256 aaPredicted RBP5.39□□□□□ -1.55
SMG6-209ENST00000571442 SPINK9Q5DT21 86 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 SAMD5Q5TGI4 173 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 CTRB2Q6GPI1 263 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 SELENOHQ8IZQ5 122 aaKnown RBP5.39□□□□□ -1.55
SMG6-209ENST00000571442 TTC9CQ8N5M4 171 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 WFDC9Q8NEX5 89 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 OR11H1Q8NG94 326 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 OR4F17Q8NGA8 305 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 UBE2E2Q96LR5 201 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 OR4F4Q96R69 305 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 QTRT1Q9BXR0 403 aaKnown RBP5.39□□□□□ -1.55
SMG6-209ENST00000571442 TMEM222Q9H0R3 208 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 NDUFA4L2Q9NRX3 87 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 ZNF355PQ9NSJ1 428 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 TMEM14BQ9NUH8 114 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 COA4Q9NYJ1 87 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 PTTG2Q9NZH5 202 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 SCP2D1Q9UJQ7 156 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 C14orf166Q9Y224 244 aaKnown RBP5.39□□□□□ -1.55
SMG6-209ENST00000571442 S4R3C0 116 aa5.39□□□□□ -1.55
SMG6-209ENST00000571442 C15orf61A6NNL5 157 aa5.38□□□□□ -1.55
SMG6-209ENST00000571442 NPIPB5A8MRT5 1133 aa5.38□□□□□ -1.55
SMG6-209ENST00000571442 ACTL6BO94805 426 aa5.38□□□□□ -1.55
SMG6-209ENST00000571442 NDUFB8O95169 186 aa5.38□□□□□ -1.55
SMG6-209ENST00000571442 BRI3O95415 125 aa5.38□□□□□ -1.55
SMG6-209ENST00000571442 CDS2O95674 445 aa5.38□□□□□ -1.55
SMG6-209ENST00000571442 IGHV3-23P01764 117 aa5.38□□□□□ -1.55
SMG6-209ENST00000571442 PF4P02776 101 aa5.38□□□□□ -1.55
SMG6-209ENST00000571442 PRB2P02812 416 aaPredicted RBP5.38□□□□□ -1.55
SMG6-209ENST00000571442 LGALS1P09382 135 aaKnown RBP5.38□□□□□ -1.55
SMG6-209ENST00000571442 AKR1C4P17516 323 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms