RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 FAM212BQ9NTI7 297 aaPredicted RBP13.88□□□□□ -0.19
LITAF-204ENST00000570798 TMEM140Q9NV12 185 aa13.88□□□□□ -0.19
LITAF-204ENST00000570798 RABL2AQ9UBK7 228 aaPredicted RBP13.88□□□□□ -0.19
LITAF-204ENST00000570798 RABL2BQ9UNT1 228 aa13.88□□□□□ -0.19
LITAF-204ENST00000570798 NPIPB5A8MRT5 1133 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 PRH1P02810 166 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 IFNA6P05013 189 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 CRYGCP07315 174 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 INSL3P51460 131 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 TAS2R19P59542 299 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 KLK9Q2XQG4 91 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 DMBX1Q8NFW5 382 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 SMIM4Q8WVI0 70 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 FYTTD1Q96QD9 318 aaKnown RBP13.87□□□□□ -0.19
LITAF-204ENST00000570798 AKIP1Q9NQ31 210 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 ZMAT5Q9UDW3 170 aaKnown RBP13.87□□□□□ -0.19
LITAF-204ENST00000570798 KLK9Q9UKQ9 250 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 ZNF257Q9Y2Q1 563 aa13.87□□□□□ -0.19
LITAF-204ENST00000570798 FAM223BA6NKX1 122 aa13.86□□□□□ -0.19
LITAF-204ENST00000570798 MARCH11A6NNE9 402 aa13.86□□□□□ -0.19
LITAF-204ENST00000570798 OR2B8PP59922 312 aa13.86□□□□□ -0.19
LITAF-204ENST00000570798 RHOGP84095 191 aa13.86□□□□□ -0.19
LITAF-204ENST00000570798 ACSM6Q6P461 480 aa13.86□□□□□ -0.19
LITAF-204ENST00000570798 TBC1D26Q86UD7 250 aa13.86□□□□□ -0.19
LITAF-204ENST00000570798 FAM223AQ8IWN6 122 aa13.86□□□□□ -0.19
LITAF-204ENST00000570798 OR4D10Q8NGI6 311 aa13.86□□□□□ -0.19
LITAF-204ENST00000570798 SOSTQ9BQB4 213 aa13.86□□□□□ -0.19
LITAF-204ENST00000570798 C6orf62Q9GZU0 229 aaPredicted RBP13.86□□□□□ -0.19
LITAF-204ENST00000570798 RBM38Q9H0Z9 239 aaKnown RBP13.86□□□□□ -0.19
LITAF-204ENST00000570798 ANKRD34BA5PLL1 514 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 AREGP15514 252 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 RPA2P15927 270 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 CTRB1P17538 263 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 ZP3P21754 424 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 PTBP1P26599 531 aaKnown RBP eCLIP13.85□□□□□ -0.191e-6■■■■□ 22.8
LITAF-204ENST00000570798 PSMB6P28072 239 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 S100GP29377 79 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 RND3P61587 244 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 IL18Q14116 193 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 CTRB2Q6GPI1 263 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 STEAP1BQ6NZ63 245 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 NECAP1Q8NC96 275 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 ZNF486Q96H40 463 aaPredicted RBP13.85□□□□□ -0.19
LITAF-204ENST00000570798 FANCD2OSQ96PS1 177 aa13.85□□□□□ -0.19
LITAF-204ENST00000570798 PEF1Q9UBV8 284 aaKnown RBP13.85□□□□□ -0.19
LITAF-204ENST00000570798 RAB3DO95716 219 aa13.84□□□□□ -0.19
LITAF-204ENST00000570798 TRBV12-3P01733 135 aa13.84□□□□□ -0.19
LITAF-204ENST00000570798 TNFSF8P32971 234 aa13.84□□□□□ -0.19
LITAF-204ENST00000570798 G6PCP35575 357 aa13.84□□□□□ -0.19
LITAF-204ENST00000570798 ERVK-16P61578 105 aa13.84□□□□□ -0.19
LITAF-204ENST00000570798 C19orf35Q6ZS72 473 aa13.84□□□□□ -0.19
LITAF-204ENST00000570798 ZNF429Q86V71 674 aa13.84□□□□□ -0.19
LITAF-204ENST00000570798 TERB2Q8NHR7 220 aa13.84□□□□□ -0.19
LITAF-204ENST00000570798 MCFD2Q8NI22 146 aa13.84□□□□□ -0.19
LITAF-204ENST00000570798 SRSF8Q9BRL6 282 aaKnown RBP13.84□□□□□ -0.19
LITAF-204ENST00000570798 COMMD5Q9GZQ3 224 aa13.84□□□□□ -0.19
LITAF-204ENST00000570798 IGLC7A0M8Q6 106 aa13.83□□□□□ -0.2
LITAF-204ENST00000570798 DPPA5A6NC42 116 aa13.83□□□□□ -0.2
LITAF-204ENST00000570798 GSTZ1O43708 216 aaPredicted RBP13.83□□□□□ -0.2
LITAF-204ENST00000570798 KRASP01116 189 aa13.83□□□□□ -0.2
LITAF-204ENST00000570798 IGKV1-39P01597 117 aa13.83□□□□□ -0.2
LITAF-204ENST00000570798 IGKV1D-39P04432 117 aa13.83□□□□□ -0.2
LITAF-204ENST00000570798 ATP5G2Q06055 141 aa13.83□□□□□ -0.2
LITAF-204ENST00000570798 KLF5Q13887 457 aaPredicted RBP13.83□□□□□ -0.2
LITAF-204ENST00000570798 MRGPRFQ96AM1 343 aa13.83□□□□□ -0.2
LITAF-204ENST00000570798 TGP01266 2768 aa13.82□□□□□ -0.2
LITAF-204ENST00000570798 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.82□□□□□ -0.2
LITAF-204ENST00000570798 TEX50A0A1B0GTY4 177 aa13.82□□□□□ -0.2
LITAF-204ENST00000570798 OR2J3O76001 311 aa13.82□□□□□ -0.2
LITAF-204ENST00000570798 PGAM2P15259 253 aa13.82□□□□□ -0.2
LITAF-204ENST00000570798 PI3P19957 117 aa13.82□□□□□ -0.2
LITAF-204ENST00000570798 ECI1P42126 302 aa13.82□□□□□ -0.2
LITAF-204ENST00000570798 EXOSC2Q13868 293 aaKnown RBP13.82□□□□□ -0.2
LITAF-204ENST00000570798 MEF2DQ14814 521 aa13.82□□□□□ -0.2
LITAF-204ENST00000570798 THOC7Q6I9Y2 204 aaKnown RBP13.82□□□□□ -0.2
LITAF-204ENST00000570798 SEC22AQ96IW7 307 aa13.82□□□□□ -0.2
LITAF-204ENST00000570798 QTRT1Q9BXR0 403 aaKnown RBP13.82□□□□□ -0.2
LITAF-204ENST00000570798 RSL24D1Q9UHA3 163 aaKnown RBP13.82□□□□□ -0.2
LITAF-204ENST00000570798 DMRT1Q9Y5R6 373 aa13.82□□□□□ -0.2
LITAF-204ENST00000570798 CCDC160A6NGH7 325 aa13.81□□□□□ -0.2
LITAF-204ENST00000570798 ZNF701M0R085 212 aaPredicted RBP13.81□□□□□ -0.2
LITAF-204ENST00000570798 SAP30O75446 220 aa13.81□□□□□ -0.2
LITAF-204ENST00000570798 NDUFB8O95169 186 aa13.81□□□□□ -0.2
LITAF-204ENST00000570798 REG1AP05451 166 aa13.81□□□□□ -0.2
LITAF-204ENST00000570798 PPP5CP53041 499 aa13.81□□□□□ -0.2
LITAF-204ENST00000570798 PIGPP57054 158 aa13.81□□□□□ -0.2
LITAF-204ENST00000570798 C15orf32Q32M92 178 aa13.81□□□□□ -0.2
LITAF-204ENST00000570798 FAAP20Q6NZ36 180 aa13.81□□□□□ -0.2
LITAF-204ENST00000570798 OR1L8Q8NGR8 309 aa13.81□□□□□ -0.2
LITAF-204ENST00000570798 FBXL7Q9UJT9 491 aa13.81□□□□□ -0.2
LITAF-204ENST00000570798 NSG2Q9Y328 171 aa13.81□□□□□ -0.2
LITAF-204ENST00000570798 SORL1Q92673 2214 aa13.8□□□□□ -0.2
LITAF-204ENST00000570798 IGLV11-55A0A075B6I3 123 aa13.8□□□□□ -0.2
LITAF-204ENST00000570798 ANKRD20A5PA0PJZ0 165 aa13.8□□□□□ -0.2
LITAF-204ENST00000570798 FABP12A6NFH5 140 aa13.8□□□□□ -0.2
LITAF-204ENST00000570798 H0Y980 276 aa13.8□□□□□ -0.2
LITAF-204ENST00000570798 DHFRP00374 187 aa13.8□□□□□ -0.2
LITAF-204ENST00000570798 TRAPPC2P0DI81 140 aa13.8□□□□□ -0.2
LITAF-204ENST00000570798 TRAPPC2BP0DI82 140 aa13.8□□□□□ -0.2
LITAF-204ENST00000570798 HIST1H1BP16401 226 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms