RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PUSL1Q8N0Z8 303 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 GBGT1Q8N5D6 347 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 FAM89BQ8N5H3 189 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 OR10J5Q8NHC4 309 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 TMEM167AQ8TBQ9 72 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 PYDC1Q8WXC3 89 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 ARHGAP5-AS1Q96IT6 56 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 OR2A7Q96R45 310 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 CABLES2Q9BTV7 478 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 SMPXQ9UHP9 88 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 HSF4Q9ULV5 492 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 RBM7Q9Y580 266 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 ORC6Q9Y5N6 252 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 PNMA8CA0A1B0GUJ8 204 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 EI24O14681 340 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 CHEK1O14757 476 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 INAFM2P0DMQ5 153 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 CELP19835 753 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 DCKP27707 260 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 RPL30P62888 115 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 SMN1Q16637 294 aaKnown RBP7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 OR2B11Q5JQS5 317 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 FAM90A2PQ658T7 463 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 LEMD1Q68G75 181 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 ZNF485Q8NCK3 441 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 ZNF414Q96IQ9 312 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 RHPN1-AS1Q9BWJ2 59 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 PECRQ9BY49 303 aa7.48□□□□□ -1.21
CTDNEP1-202ENST00000570380 IGHV3-49A0A0A0MS15 119 aa7.47□□□□□ -1.21
CTDNEP1-202ENST00000570380 C15orf62A8K5M9 175 aa7.47□□□□□ -1.21
CTDNEP1-202ENST00000570380 EPM2AB3EWF7 344 aa7.47□□□□□ -1.21
CTDNEP1-202ENST00000570380 RAB27BO00194 218 aa7.47□□□□□ -1.21
CTDNEP1-202ENST00000570380 CRHBPP24387 322 aa7.47□□□□□ -1.21
CTDNEP1-202ENST00000570380 DEFB131AP59861 70 aa7.47□□□□□ -1.21
CTDNEP1-202ENST00000570380 LRRTM1Q86UE6 522 aa7.47□□□□□ -1.21
CTDNEP1-202ENST00000570380 VSTM2AQ8TAG5 236 aa7.47□□□□□ -1.21
CTDNEP1-202ENST00000570380 VN1R17PQ8TDU5 208 aa7.47□□□□□ -1.21
CTDNEP1-202ENST00000570380 BSCL2Q96G97 398 aaPredicted RBP7.47□□□□□ -1.21
CTDNEP1-202ENST00000570380 URM1Q9BTM9 101 aaKnown RBP7.47□□□□□ -1.21
CTDNEP1-202ENST00000570380 IGHV7-4-1A0A0J9YVY3 117 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 IGLC7A0M8Q6 106 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 F8W735 103 aaPredicted RBP7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 WBP4O75554 376 aaKnown RBP7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 BPNT1O95861 308 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 CD37P11049 281 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 C4BPBP20851 252 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 BRWD1-AS2P59051 145 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 RPL8P62917 257 aaKnown RBP7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 INSL4Q14641 139 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 RNF212Q495C1 297 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 PLAC9Q5JTB6 97 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 LIPKQ5VXJ0 399 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 TTC23Q5W5X9 447 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 KCTD9Q7L273 389 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 ZNF367Q7RTV3 350 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 H1FOOQ8IZA3 346 aaPredicted RBP7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 TMEM116Q8NCL8 245 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 MAFIPQ8WZ33 124 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 THYN1Q9P016 225 aa7.46□□□□□ -1.22
CTDNEP1-202ENST00000570380 FLG2Q5D862 2391 aaPredicted RBP7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 IGHV3OR16-13A0A075B7E8 117 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 IGHV3-74A0A0B4J1X5 117 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 ANKRD65E5RJM6 399 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 J3QRK9 145 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 DIRAS3O95661 229 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 CDK1P06493 297 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 HLA-GP17693 338 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 MYL12AP19105 171 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 OR2B8PP59922 312 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 MORN3Q6PF18 240 aaPredicted RBP7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 SPSB3Q6PJ21 355 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 SPATA12Q7Z6I5 190 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 TRPT1Q86TN4 253 aaKnown RBP7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 STHQ8IWL8 128 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 FAM24BQ8N5W8 94 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 CSNK1G2-AS1Q8NCQ2 148 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 GIMAP1Q8WWP7 306 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 GINS4Q9BRT9 223 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 CLEC5AQ9NY25 188 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 TBC1D24Q9ULP9 559 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 DIMT1Q9UNQ2 313 aaKnown RBP7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 MRPS7Q9Y2R9 242 aaKnown RBP7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 KCNK7Q9Y2U2 307 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 PRELID3BQ9Y3B1 194 aa7.45□□□□□ -1.22
CTDNEP1-202ENST00000570380 IGHV3-21A0A0B4J1V1 117 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 LOC100130705A0A1B0GUX0 176 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 DFFBO76075 338 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 IGLV2-14P01704 120 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 CD1AP06126 327 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 FCGR3AP08637 254 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 NPY1RP25929 384 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 MAPK3P27361 379 aaPredicted RBP7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 P2RY14Q15391 338 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 TMEM41BQ5BJD5 291 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 RBM48Q5RL73 367 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 TCF24Q7RTU0 167 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 OR4S2Q8NH73 311 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 SCARB1Q8WTV0 552 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 CMTM3Q96MX0 182 aa7.44□□□□□ -1.22
CTDNEP1-202ENST00000570380 TMEM14BQ9NUH8 114 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms